The 2.0 version of rSNPBase

Variant report

Variant rs73454227
Chromosome Location chr13:30155874-30155875
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30126000-30161400 Weak transcription Primary B cells from cord blood blood
2 chr13:30127600-30156400 Weak transcription Lung lung
3 chr13:30128000-30163600 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr13:30128600-30161800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr13:30128800-30168200 Weak transcription Primary T cells from cord blood blood
6 chr13:30138800-30159800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr13:30147200-30163200 Weak transcription Fetal Intestine Small intestine
8 chr13:30147800-30163600 Weak transcription Thymus Thymus
9 chr13:30148200-30156400 Weak transcription Stomach Mucosa stomach
10 chr13:30148200-30156600 Weak transcription A549 lung
11 chr13:30148200-30156800 Weak transcription NHLF lung
12 chr13:30148400-30160400 Weak transcription Primary hematopoietic stem cells blood
13 chr13:30148400-30167400 Weak transcription Primary B cells from peripheral blood blood
14 chr13:30148600-30156000 Weak transcription Small Intestine intestine
15 chr13:30148600-30160800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr13:30148800-30157400 Weak transcription GM12878-XiMat blood
17 chr13:30151600-30156000 Weak transcription Fetal Stomach stomach
18 chr13:30151600-30156800 Enhancers Colon Smooth Muscle Colon
19 chr13:30151600-30157600 Enhancers Fetal Heart heart
20 chr13:30152400-30163200 Weak transcription Spleen Spleen
21 chr13:30152600-30157800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr13:30152600-30168200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr13:30153000-30160800 Weak transcription HUVEC blood vessel
24 chr13:30153000-30161200 Weak transcription Aorta Aorta
25 chr13:30153200-30156000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr13:30153200-30156800 Weak transcription HSMMtube muscle
27 chr13:30153200-30157400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
28 chr13:30153200-30161000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
29 chr13:30153400-30156200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr13:30153400-30159200 Weak transcription Brain Angular Gyrus brain
31 chr13:30153600-30156200 Weak transcription Brain Hippocampus Middle brain
32 chr13:30153600-30163200 Weak transcription Fetal Muscle Trunk muscle
33 chr13:30153800-30157000 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr13:30153800-30157600 Enhancers Right Ventricle heart
35 chr13:30153800-30158200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr13:30154000-30156200 Enhancers ES-I3 Cell Line embryonic stem cell
37 chr13:30154200-30156200 Weak transcription Fetal Muscle Leg muscle
38 chr13:30154400-30156400 Weak transcription HepG2 liver
39 chr13:30154400-30157400 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr13:30154400-30158400 Enhancers HUES48 Cell Line embryonic stem cell
41 chr13:30154400-30158800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr13:30154600-30156000 Weak transcription Colonic Mucosa Colon
43 chr13:30154600-30156200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr13:30154600-30156200 Weak transcription Esophagus oesophagus
45 chr13:30154600-30157200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr13:30154600-30157600 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr13:30154600-30158400 Enhancers iPS-18 Cell Line embryonic stem cell
48 chr13:30154600-30160600 Weak transcription Dnd41 blood
49 chr13:30154600-30163400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr13:30154800-30157000 Enhancers NH-A brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015