The 2.0 version of rSNPBase

Variant report

Variant rs9579411
Chromosome Location chr13:30162789-30162790
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30128000-30163600 Weak transcription Primary T regulatory cells fromperipheralblood blood
2 chr13:30128800-30168200 Weak transcription Primary T cells from cord blood blood
3 chr13:30147200-30163200 Weak transcription Fetal Intestine Small intestine
4 chr13:30147800-30163600 Weak transcription Thymus Thymus
5 chr13:30148400-30167400 Weak transcription Primary B cells from peripheral blood blood
6 chr13:30152400-30163200 Weak transcription Spleen Spleen
7 chr13:30152600-30168200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr13:30153600-30163200 Weak transcription Fetal Muscle Trunk muscle
9 chr13:30154600-30163400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr13:30156000-30163600 Weak transcription Primary T cells fromperipheralblood blood
11 chr13:30156400-30164000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr13:30156400-30168400 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr13:30156600-30163000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr13:30156600-30163400 Weak transcription Placenta Amnion Placenta Amnion
15 chr13:30156600-30164000 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr13:30156800-30163400 Weak transcription Fetal Muscle Leg muscle
17 chr13:30156800-30168200 Weak transcription Fetal Brain Female brain
18 chr13:30156800-30168400 Weak transcription Brain Inferior Temporal Lobe brain
19 chr13:30157000-30164000 Weak transcription Brain Hippocampus Middle brain
20 chr13:30157200-30163000 Weak transcription Stomach Smooth Muscle stomach
21 chr13:30157200-30168400 Weak transcription Brain Germinal Matrix brain
22 chr13:30157400-30163600 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr13:30157600-30163200 Weak transcription Right Ventricle heart
24 chr13:30157600-30163400 Weak transcription HSMMtube muscle
25 chr13:30157600-30163800 Weak transcription Right Atrium heart
26 chr13:30157600-30166000 Weak transcription H9 Cell Line embryonic stem cell
27 chr13:30157600-30168200 Weak transcription Duodenum Mucosa Duodenum
28 chr13:30157600-30168200 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr13:30157800-30163000 Weak transcription Left Ventricle heart
30 chr13:30157800-30163400 Weak transcription NHLF lung
31 chr13:30157800-30163600 Weak transcription Rectal Smooth Muscle rectum
32 chr13:30157800-30166400 Weak transcription Lung lung
33 chr13:30157800-30168200 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr13:30157800-30168400 Weak transcription ES-WA7 Cell Line embryonic stem cell
35 chr13:30157800-30168400 Weak transcription Small Intestine intestine
36 chr13:30157800-30168600 Weak transcription Ovary ovary
37 chr13:30158000-30163200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr13:30158000-30163600 Weak transcription Brain Cingulate Gyrus brain
39 chr13:30158000-30168600 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr13:30158200-30166800 Weak transcription Fetal Thymus thymus
41 chr13:30158200-30168400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr13:30158800-30165600 Weak transcription A549 lung
43 chr13:30159400-30165800 Weak transcription K562 blood
44 chr13:30159400-30168200 Weak transcription Brain Angular Gyrus brain
45 chr13:30159600-30164000 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr13:30159600-30164200 Weak transcription Fetal Brain Male brain
47 chr13:30159800-30165600 Strong transcription Primary hematopoietic stem cells short term culture blood
48 chr13:30160000-30164000 Weak transcription Hela-S3 cervix
49 chr13:30160000-30167400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr13:30160000-30168400 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015