The 2.0 version of rSNPBase

Variant report

Variant rs9579410
Chromosome Location chr13:30152140-30152141
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30126000-30161400 Weak transcription Primary B cells from cord blood blood
2 chr13:30127600-30156400 Weak transcription Lung lung
3 chr13:30128000-30163600 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr13:30128600-30161800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr13:30128800-30155800 Weak transcription Primary T cells fromperipheralblood blood
6 chr13:30128800-30168200 Weak transcription Primary T cells from cord blood blood
7 chr13:30138600-30154000 Weak transcription H9 Cell Line embryonic stem cell
8 chr13:30138800-30155800 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr13:30138800-30159800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr13:30144400-30152400 Weak transcription iPS-15b Cell Line embryonic stem cell
11 chr13:30144400-30155600 Weak transcription HMEC breast
12 chr13:30144600-30154000 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr13:30144800-30154000 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr13:30146000-30154000 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr13:30146400-30154000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr13:30146400-30155400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
17 chr13:30146800-30154000 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr13:30147000-30152400 Weak transcription H1 Cell Line embryonic stem cell
19 chr13:30147000-30154200 Weak transcription Hela-S3 cervix
20 chr13:30147200-30163200 Weak transcription Fetal Intestine Small intestine
21 chr13:30147600-30155400 Weak transcription Fetal Brain Male brain
22 chr13:30147800-30152600 Weak transcription NH-A brain
23 chr13:30147800-30152800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr13:30147800-30153000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr13:30147800-30155200 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr13:30147800-30155600 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr13:30147800-30163600 Weak transcription Thymus Thymus
28 chr13:30148200-30152600 Weak transcription HSMMtube muscle
29 chr13:30148200-30155600 Weak transcription Ovary ovary
30 chr13:30148200-30156400 Weak transcription Stomach Mucosa stomach
31 chr13:30148200-30156600 Weak transcription A549 lung
32 chr13:30148200-30156800 Weak transcription NHLF lung
33 chr13:30148400-30152200 Weak transcription HUVEC blood vessel
34 chr13:30148400-30152400 Weak transcription Duodenum Mucosa Duodenum
35 chr13:30148400-30155800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr13:30148400-30160400 Weak transcription Primary hematopoietic stem cells blood
37 chr13:30148400-30167400 Weak transcription Primary B cells from peripheral blood blood
38 chr13:30148600-30152200 Weak transcription K562 blood
39 chr13:30148600-30152800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr13:30148600-30154000 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr13:30148600-30154600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr13:30148600-30155600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr13:30148600-30156000 Weak transcription Small Intestine intestine
44 chr13:30148600-30160800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr13:30148800-30154000 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr13:30148800-30157400 Weak transcription GM12878-XiMat blood
47 chr13:30149000-30152600 Strong transcription Dnd41 blood
48 chr13:30149200-30155600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr13:30149800-30152800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr13:30149800-30154600 Enhancers Pancreas Pancrea

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Last update: Aug 31, 2015