The 2.0 version of rSNPBase

Variant report

Variant rs9579413
Chromosome Location chr13:30164111-30164112
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30128800-30168200 Weak transcription Primary T cells from cord blood blood
2 chr13:30148400-30167400 Weak transcription Primary B cells from peripheral blood blood
3 chr13:30152600-30168200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr13:30156400-30168400 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr13:30156800-30168200 Weak transcription Fetal Brain Female brain
6 chr13:30156800-30168400 Weak transcription Brain Inferior Temporal Lobe brain
7 chr13:30157200-30168400 Weak transcription Brain Germinal Matrix brain
8 chr13:30157600-30166000 Weak transcription H9 Cell Line embryonic stem cell
9 chr13:30157600-30168200 Weak transcription Duodenum Mucosa Duodenum
10 chr13:30157600-30168200 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr13:30157800-30166400 Weak transcription Lung lung
12 chr13:30157800-30168200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr13:30157800-30168400 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr13:30157800-30168400 Weak transcription Small Intestine intestine
15 chr13:30157800-30168600 Weak transcription Ovary ovary
16 chr13:30158000-30168600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr13:30158200-30166800 Weak transcription Fetal Thymus thymus
18 chr13:30158200-30168400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr13:30158800-30165600 Weak transcription A549 lung
20 chr13:30159400-30165800 Weak transcription K562 blood
21 chr13:30159400-30168200 Weak transcription Brain Angular Gyrus brain
22 chr13:30159600-30164200 Weak transcription Fetal Brain Male brain
23 chr13:30159800-30165600 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr13:30160000-30167400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
25 chr13:30160000-30168400 Weak transcription Psoas Muscle Psoas
26 chr13:30160200-30164400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr13:30160200-30167000 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr13:30160800-30165400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr13:30161400-30164400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr13:30161400-30165400 Genic enhancers Osteobl bone
31 chr13:30161400-30167400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr13:30161600-30165400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr13:30161600-30165600 Weak transcription HUVEC blood vessel
34 chr13:30161800-30164200 Enhancers Muscle Satellite Cultured Cells --
35 chr13:30161800-30164400 Enhancers Cortex derived primary cultured neurospheres brain
36 chr13:30161800-30164400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
37 chr13:30161800-30164800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr13:30162000-30165200 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
39 chr13:30162000-30168400 Weak transcription Aorta Aorta
40 chr13:30162200-30168400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr13:30162400-30164400 Enhancers iPS-15b Cell Line embryonic stem cell
42 chr13:30162400-30164800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr13:30162600-30164600 Enhancers NH-A brain
44 chr13:30162600-30164800 Enhancers HUES6 Cell Line embryonic stem cell
45 chr13:30162600-30164800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
46 chr13:30162600-30165000 Enhancers H1 Cell Line embryonic stem cell
47 chr13:30162600-30165800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr13:30162600-30167200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr13:30162600-30167800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr13:30162600-30168200 Weak transcription Primary B cells from cord blood blood

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Last update: Aug 31, 2015