Variant report

Variant	rs73546803
Chromosome Location	chr6:133815737-133815738
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs11962716	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11964752	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12662135	0.97[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs12663242	1.00[ASN][1000 genomes]
rs12663243	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12664235	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17062582	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17062630	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17062634	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1883388	0.82[EUR][1000 genomes]
rs2143012	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2179341	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3777868	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3777869	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3777871	0.82[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs3777872	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3777874	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3777878	0.82[EUR][1000 genomes]
rs3777879	0.82[AMR][1000 genomes]
rs3777880	0.82[AMR][1000 genomes]
rs3777883	0.82[AMR][1000 genomes]
rs3777885	0.97[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs3822936	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3886686	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56655335	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58073338	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59342392	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs60226395	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61276340	0.89[ASN][1000 genomes]
rs6899314	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6905892	1.00[ASN][1000 genomes]
rs6921578	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73544957	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73544971	0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73544989	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73544998	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73544999	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73546821	0.82[EUR][1000 genomes]
rs7773315	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133765800-133822000	Weak transcription	Psoas Muscle	Psoas
2	chr6:133787400-133822800	Weak transcription	Fetal Lung	lung
3	chr6:133790800-133821600	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr6:133808600-133822000	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr6:133809600-133816800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:133810200-133820800	Weak transcription	Fetal Muscle Leg	muscle
7	chr6:133810200-133821400	Weak transcription	Hela-S3	cervix
8	chr6:133812200-133820400	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr6:133815200-133815800	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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