Variant report

Variant	rs73751604
Chromosome Location	chr5:36165992-36165993
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr5:36164116..36166672-chr5:36172542..36174152,2	K562	blood:
2	chr5:36160015..36162178-chr5:36164182..36166735,3	K562	blood:
3	chr5:36162218..36166672-chr5:36172518..36174152,4	K562	blood:

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs155539	1.00[AMR][1000 genomes]
rs155540	1.00[AMR][1000 genomes]
rs155542	1.00[AMR][1000 genomes]
rs155545	1.00[AMR][1000 genomes]
rs155547	1.00[AMR][1000 genomes]
rs155548	1.00[AMR][1000 genomes]
rs155549	1.00[AMR][1000 genomes]
rs267752	1.00[AMR][1000 genomes]
rs267755	1.00[AMR][1000 genomes]
rs267756	1.00[AMR][1000 genomes]
rs267760	1.00[AMR][1000 genomes]
rs267761	1.00[AMR][1000 genomes]
rs267762	1.00[AMR][1000 genomes]
rs267763	1.00[AMR][1000 genomes]
rs267788	1.00[AMR][1000 genomes]
rs267791	1.00[AMR][1000 genomes]
rs267794	1.00[AMR][1000 genomes]
rs33614	1.00[AMR][1000 genomes]
rs33618	1.00[AMR][1000 genomes]
rs33675	1.00[AMR][1000 genomes]
rs33677	1.00[AMR][1000 genomes]
rs33680	1.00[AMR][1000 genomes]
rs33681	1.00[AMR][1000 genomes]
rs40029	1.00[AMR][1000 genomes]
rs40031	1.00[AMR][1000 genomes]
rs41113	1.00[AMR][1000 genomes]
rs41114	1.00[AMR][1000 genomes]
rs42213	1.00[AMR][1000 genomes]
rs423753	1.00[AMR][1000 genomes]
rs56135557	1.00[AMR][1000 genomes]
rs56989767	1.00[AMR][1000 genomes]
rs57273729	1.00[AMR][1000 genomes]
rs57579833	1.00[AMR][1000 genomes]
rs58168401	1.00[AMR][1000 genomes]
rs58457055	1.00[AMR][1000 genomes]
rs59164775	1.00[AMR][1000 genomes]
rs6890988	1.00[AMR][1000 genomes]
rs73076197	1.00[AMR][1000 genomes]
rs73076199	1.00[AMR][1000 genomes]
rs73078005	1.00[AMR][1000 genomes]
rs73078010	1.00[AMR][1000 genomes]
rs73078011	1.00[AMR][1000 genomes]
rs73748791	1.00[AMR][1000 genomes]
rs73751606	1.00[AMR][1000 genomes]
rs73751607	1.00[AMR][1000 genomes]
rs73751624	1.00[AMR][1000 genomes]
rs7713019	1.00[AMR][1000 genomes]
rs7723762	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830262	chr5:36074311-36293872	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	63 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:36153800-36184400	Strong transcription	HUES64 Cell Line	embryonic stem cell
2	chr5:36154000-36168200	Strong transcription	Primary T cells from cord blood	blood
3	chr5:36154000-36168200	Weak transcription	Rectal Smooth Muscle	rectum
4	chr5:36154000-36175400	Strong transcription	iPS-18 Cell Line	embryonic stem cell
5	chr5:36154000-36175600	Strong transcription	H1 Cell Line	embryonic stem cell
6	chr5:36154000-36175600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr5:36154000-36184200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr5:36154200-36168400	Strong transcription	Primary T cells fromperipheralblood	blood
9	chr5:36154200-36179000	Strong transcription	A549	lung
10	chr5:36154200-36184400	Strong transcription	HUES6 Cell Line	embryonic stem cell
11	chr5:36154200-36184400	Strong transcription	Fetal Thymus	thymus
12	chr5:36154400-36175000	Strong transcription	Primary B cells from peripheral blood	blood
13	chr5:36154400-36175200	Strong transcription	Thymus	Thymus
14	chr5:36154400-36184400	Strong transcription	iPS-20b Cell Line	embryonic stem cell
15	chr5:36154400-36210800	Weak transcription	Small Intestine	intestine
16	chr5:36154600-36168000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
17	chr5:36154600-36168200	Strong transcription	Primary T helper cells fromperipheralblood	blood
18	chr5:36154600-36176000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr5:36155200-36176000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr5:36155800-36166000	Strong transcription	Primary T helper cells PMA-I stimulated	--
21	chr5:36156000-36176400	Strong transcription	Primary B cells from cord blood	blood
22	chr5:36156600-36175400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr5:36156600-36176000	Strong transcription	K562	blood
24	chr5:36156600-36178000	Strong transcription	HUES48 Cell Line	embryonic stem cell
25	chr5:36156800-36173600	Weak transcription	Psoas Muscle	Psoas
26	chr5:36156800-36175400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr5:36157000-36172600	Strong transcription	Fetal Lung	lung
28	chr5:36157800-36169200	Strong transcription	NHLF	lung
29	chr5:36158200-36175800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
30	chr5:36158200-36183200	Strong transcription	Hela-S3	cervix
31	chr5:36158400-36182000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr5:36158400-36184400	Strong transcription	Monocytes-CD14+_RO01746	blood
33	chr5:36158600-36170800	Weak transcription	Pancreatic Islets	Pancreatic Islet
34	chr5:36158600-36176000	Strong transcription	Osteobl	bone
35	chr5:36158600-36184600	Strong transcription	Primary monocytes fromperipheralblood	blood
36	chr5:36158600-36185600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
37	chr5:36158800-36169200	Strong transcription	Stomach Smooth Muscle	stomach
38	chr5:36158800-36175200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
39	chr5:36158800-36175400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr5:36159000-36170000	Strong transcription	Brain Germinal Matrix	brain
41	chr5:36159000-36170000	Strong transcription	Fetal Brain Female	brain
42	chr5:36159200-36175200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr5:36159200-36175800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
44	chr5:36159600-36174000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr5:36159600-36174000	Strong transcription	Adipose Nuclei	Adipose
46	chr5:36159800-36168200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
47	chr5:36159800-36175400	Strong transcription	Skeletal Muscle Female	skeletal muscle
48	chr5:36159800-36176000	Strong transcription	Primary hematopoietic stem cells	blood
49	chr5:36160000-36166200	Strong transcription	NH-A	brain
50	chr5:36160000-36167400	Weak transcription	Primary T helper naive cells from peripheral blood	blood

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