Variant report

rSNPs within LD-proxies of this variant (count:19)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv470827	chr3:109195046-109433855	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:109402600-109406800	Enhancers	Rectal Smooth Muscle	rectum
2	chr3:109403600-109405200	Enhancers	Colon Smooth Muscle	Colon
3	chr3:109403600-109405200	Enhancers	Pancreas	Pancrea
4	chr3:109403600-109405200	Enhancers	Stomach Mucosa	stomach
5	chr3:109403600-109405200	Enhancers	HMEC	breast
6	chr3:109403800-109404400	Flanking Active TSS	Muscle Satellite Cultured Cells	--
7	chr3:109403800-109405000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr3:109403800-109405000	Enhancers	NH-A	brain
9	chr3:109403800-109405200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr3:109403800-109405200	Enhancers	Hela-S3	cervix
11	chr3:109404000-109404400	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr3:109404000-109404400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr3:109404000-109404400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr3:109404000-109404400	Flanking Active TSS	Osteobl	bone
15	chr3:109404000-109404600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
16	chr3:109404000-109404800	Enhancers	Aorta	Aorta
17	chr3:109404000-109404800	Enhancers	HSMMtube	muscle
18	chr3:109404000-109405000	Enhancers	A549	lung
19	chr3:109404000-109405200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr3:109404200-109404600	Enhancers	NHLF	lung

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