The 2.0 version of rSNPBase

Variant report

Variant rs7516301
Chromosome Location chr1:172372260-172372261
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:172352400-172386400 Weak transcription Psoas Muscle Psoas
2 chr1:172367000-172372800 Enhancers Primary T cells from cord blood blood
3 chr1:172368400-172390800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr1:172368600-172374800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:172368800-172376800 Weak transcription Fetal Brain Male brain
6 chr1:172369200-172372400 Enhancers Aorta Aorta
7 chr1:172369400-172372400 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr1:172369400-172373200 Weak transcription Fetal Brain Female brain
9 chr1:172369600-172372400 Weak transcription Brain Hippocampus Middle brain
10 chr1:172369600-172372400 Weak transcription Brain Inferior Temporal Lobe brain
11 chr1:172369600-172377000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:172369600-172377600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:172369800-172375000 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:172369800-172375000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:172370000-172372400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:172370200-172372400 Weak transcription NHDF-Ad bronchial
17 chr1:172370200-172373000 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:172370200-172385600 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr1:172370600-172378200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:172370600-172378200 Weak transcription Fetal Kidney kidney
21 chr1:172371600-172372600 Enhancers Brain Anterior Caudate brain
22 chr1:172371800-172372600 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr1:172371800-172372800 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr1:172371800-172373000 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr1:172371800-172373000 Enhancers Brain Cingulate Gyrus brain
26 chr1:172372000-172372400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr1:172372000-172372600 Enhancers Ovary ovary
28 chr1:172372000-172372800 Enhancers Primary Natural Killer cells fromperipheralblood blood
29 chr1:172372000-172373000 Enhancers Brain Angular Gyrus brain
30 chr1:172372200-172372400 Enhancers Colon Smooth Muscle Colon
31 chr1:172372200-172372400 Enhancers Fetal Stomach stomach
32 chr1:172372200-172372600 Weak transcription Fetal Muscle Leg muscle
33 chr1:172372200-172372800 Enhancers Primary T cells fromperipheralblood blood
34 chr1:172372200-172372800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:172372200-172372800 Enhancers Fetal Intestine Small intestine
36 chr1:172372200-172373000 Enhancers Brain Substantia Nigra brain
37 chr1:172372200-172373200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:172372200-172373800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015