Variant report

(count:27 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOS	chr3:133798242-133798358	MCF10A-Er-Src	breast:	n/a	n/a
2	RFX5	chr3:133797393-133798525	Hela-S3	cervix:	n/a	n/a
3	ZNF143	chr3:133798044-133798399	Hela-S3	cervix:	n/a	n/a
4	MAX	chr3:133796237-133798447	Hela-S3	cervix:	n/a	chr3:133796610-133796619
5	GTF2F1	chr3:133797386-133798440	Hela-S3	cervix:	n/a	n/a
6	MAX	chr3:133797233-133798506	Hela-S3	cervix:	n/a	n/a
7	MAZ	chr3:133797865-133798416	Hela-S3	cervix:	n/a	n/a
8	EP300	chr3:133797374-133798495	Hela-S3	cervix:	n/a	n/a
9	USF2	chr3:133797441-133798462	Hela-S3	cervix:	n/a	n/a
10	SMC3	chr3:133798015-133798470	Hela-S3	cervix:	n/a	n/a
11	RCOR1	chr3:133797139-133798501	Hela-S3	cervix:	n/a	n/a
12	RAD21	chr3:133797320-133798468	Hela-S3	cervix:	n/a	n/a
13	JUND	chr3:133797003-133798483	Hela-S3	cervix:	n/a	n/a
14	JUN	chr3:133798192-133798335	HepG2	liver:	n/a	n/a
15	MYC	chr3:133797273-133798441	Hela-S3	cervix:	n/a	n/a
16	BRCA1	chr3:133797405-133798375	Hela-S3	cervix:	n/a	n/a
17	STAT3	chr3:133798103-133798446	Hela-S3	cervix:	n/a	n/a
18	FOS	chr3:133798211-133798423	MCF10A-Er-Src	breast:	n/a	n/a
19	PRDM1	chr3:133798148-133798453	Hela-S3	cervix:	n/a	n/a
20	CHD2	chr3:133797382-133798469	Hela-S3	cervix:	n/a	n/a
21	JUN	chr3:133797381-133798503	Hela-S3	cervix:	n/a	n/a
22	CEBPB	chr3:133798197-133798471	IMR90	lung:	n/a	n/a
23	CEBPB	chr3:133798102-133798417	HepG2	liver:	n/a	n/a
24	TBP	chr3:133798106-133798448	Hela-S3	cervix:	n/a	n/a
25	CEBPB	chr3:133797164-133798918	Hela-S3	cervix:	n/a	n/a
26	MXI1	chr3:133797333-133798425	Hela-S3	cervix:	n/a	n/a
27	FOS	chr3:133798159-133798464	MCF10A-Er-Src	breast:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:133791162..133793123-chr3:133797693..133799842,2	K562	blood:
2	chr3:133791623..133794006-chr3:133797274..133799842,2	K562	blood:
3	chr3:133797589..133799529-chr3:133799595..133802076,2	MCF-7	breast:

No data

Variant related genes	Relation type
RYK	TF binding region

rs_ID	r²[population]
rs11720811	1.00[CHB][hapmap]
rs13058950	1.00[CHB][hapmap]
rs13074733	1.00[CHB][hapmap]
rs4241361	1.00[CHB][hapmap]
rs4241362	1.00[CHB][hapmap]
rs4339087	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs4634113	1.00[CHB][hapmap]
rs58282329	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59458665	1.00[ASN][1000 genomes]
rs61145443	1.00[ASN][1000 genomes]
rs6439474	1.00[ASN][1000 genomes]
rs6770237	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6776727	1.00[ASN][1000 genomes]
rs6804439	1.00[ASN][1000 genomes]
rs6804798	1.00[CHB][hapmap]
rs72986454	1.00[ASN][1000 genomes]
rs7634038	1.00[CHB][hapmap]
rs9828294	1.00[CHB][hapmap]
rs9840711	1.00[CHB][hapmap]
rs9874493	1.00[CHB][hapmap]
rs9881514	1.00[CHB][hapmap]
rs9882333	1.00[CHB][hapmap]

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133792200-133802600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:133796200-133798800	Enhancers	NHDF-Ad	bronchial
3	chr3:133796600-133798400	Enhancers	Adipose Nuclei	Adipose
4	chr3:133796600-133798600	Enhancers	Osteobl	bone
5	chr3:133797200-133798400	Enhancers	HSMM	muscle
6	chr3:133797600-133798400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr3:133797600-133798400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr3:133798000-133798400	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr3:133798000-133798400	Flanking Active TSS	Hela-S3	cervix
10	chr3:133798000-133799200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr3:133798200-133799800	Weak transcription	Placenta	Placenta

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