Variant report

Variant	rs7702529
Chromosome Location	chr5:35742201-35742202
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10036879	1.00[AMR][1000 genomes]
rs10043797	1.00[AMR][1000 genomes]
rs10057124	1.00[AMR][1000 genomes]
rs10067721	1.00[AMR][1000 genomes]
rs10068174	1.00[AMR][1000 genomes]
rs10069609	1.00[AMR][1000 genomes]
rs10071757	1.00[AMR][1000 genomes]
rs10077049	0.85[AFR][1000 genomes]
rs12332521	1.00[AMR][1000 genomes]
rs13357321	1.00[AMR][1000 genomes]
rs28562870	1.00[AMR][1000 genomes]
rs28619956	0.85[AFR][1000 genomes]
rs6870518	1.00[AMR][1000 genomes]
rs6878544	1.00[AMR][1000 genomes]
rs7717371	1.00[AMR][1000 genomes]
rs7728863	1.00[AMR][1000 genomes]
rs7735585	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525477	chr5:35530905-35792990	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv968824	chr5:35740416-35743870	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35737400-35743000	Weak transcription	Fetal Kidney	kidney
2	chr5:35739800-35742600	Weak transcription	Pancreas	Pancrea
3	chr5:35741200-35742800	Enhancers	NHDF-Ad	bronchial
4	chr5:35742000-35743000	Enhancers	Muscle Satellite Cultured Cells	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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