Variant report

Variant	rs7705425
Chromosome Location	chr5:35364708-35364709
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:35343092..35344917-chr5:35364303..35365934,2	K562	blood:

Extended variants
information (count: 37 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10053574	0.83[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs10053745	0.82[ASN][1000 genomes]
rs10065675	0.85[ASN][1000 genomes]
rs10472257	1.00[CHB][hapmap]
rs10472962	0.85[ASN][1000 genomes]
rs10472963	0.85[ASN][1000 genomes]
rs13154357	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs16873579	0.82[ASN][1000 genomes]
rs17317102	0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs17438884	0.87[ASN][1000 genomes]
rs1864185	0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs2047935	0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs28605860	0.85[ASN][1000 genomes]
rs34503203	0.85[ASN][1000 genomes]
rs57214846	0.82[ASN][1000 genomes]
rs59625172	0.82[ASN][1000 genomes]
rs62357483	0.82[ASN][1000 genomes]
rs6451195	0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs6451196	0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs6451197	0.85[ASN][1000 genomes]
rs6863746	0.83[ASN][1000 genomes]
rs6870392	0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs6890966	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs6891313	0.82[ASN][1000 genomes]
rs6894763	0.85[ASN][1000 genomes]
rs6897727	1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs6899186	0.82[ASN][1000 genomes]
rs7701255	0.92[CHB][hapmap]
rs7715575	0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs7715855	0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs7718383	0.82[ASN][1000 genomes]
rs7722459	0.82[ASN][1000 genomes]
rs7727306	0.82[JPT][hapmap]
rs7728464	0.85[ASN][1000 genomes]
rs7728551	0.85[ASN][1000 genomes]
rs9292582	0.82[JPT][hapmap]
rs9292587	0.87[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7705425	PRLR	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35363600-35367800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr5:35363800-35365000	Enhancers	Placenta Amnion	Placenta Amnion
3	chr5:35363800-35367800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr5:35364600-35364800	Enhancers	Placenta	Placenta

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