Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10455680	0.81[AFR][1000 genomes]
rs12215081	0.94[CEU][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs1415033	0.94[CEU][hapmap]
rs6455308	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7746793	0.94[CEU][hapmap]
rs7761948	1.00[CEU][hapmap];0.85[AFR][1000 genomes];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9294819	0.94[CEU][hapmap]
rs9446086	1.00[CEU][hapmap];0.85[AFR][1000 genomes]
rs9446087	1.00[CEU][hapmap];0.85[AFR][1000 genomes]
rs9446090	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9446091	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9454685	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9454686	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9454688	1.00[CEU][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9454691	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9454692	0.88[CEU][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9454693	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs9454704	0.94[CEU][hapmap]
rs9454705	0.92[CEU][hapmap]
rs947220	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886137	chr6:69684850-70095690	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:69685800-69758800	Weak transcription	Fetal Brain Male	brain
2	chr6:69720400-69758600	Weak transcription	Cortex derived primary cultured neurospheres	brain
3	chr6:69721600-69752200	Weak transcription	Fetal Lung	lung
4	chr6:69729400-69759400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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