The 2.0 version of rSNPBase

Variant report

Variant rs7771222
Chromosome Location chr6:35320108-35320109
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35311400-35320600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr6:35311400-35323800 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr6:35311400-35326800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr6:35311600-35320400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr6:35311600-35323800 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr6:35311600-35324200 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr6:35311600-35327600 Weak transcription A549 lung
8 chr6:35311800-35320600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr6:35311800-35324000 Weak transcription Right Atrium heart
10 chr6:35311800-35331000 Weak transcription Hela-S3 cervix
11 chr6:35312000-35328200 Weak transcription Stomach Mucosa stomach
12 chr6:35312200-35326400 Weak transcription Fetal Brain Female brain
13 chr6:35312600-35324600 Weak transcription Brain Germinal Matrix brain
14 chr6:35312600-35324800 Weak transcription Fetal Heart heart
15 chr6:35312800-35326800 Weak transcription Fetal Brain Male brain
16 chr6:35312800-35327400 Strong transcription Fetal Stomach stomach
17 chr6:35313000-35335600 Weak transcription Small Intestine intestine
18 chr6:35313200-35320400 Weak transcription Fetal Kidney kidney
19 chr6:35313800-35325200 Strong transcription Liver Liver
20 chr6:35314000-35325800 Strong transcription Adipose Nuclei Adipose
21 chr6:35314400-35322400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr6:35314800-35322200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr6:35314800-35322200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr6:35314800-35325600 Strong transcription Placenta Placenta
25 chr6:35314800-35327000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:35315000-35325600 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr6:35315200-35323800 Weak transcription Brain Angular Gyrus brain
28 chr6:35315200-35326800 Weak transcription H1 Cell Line embryonic stem cell
29 chr6:35316000-35328600 Strong transcription Duodenum Mucosa Duodenum
30 chr6:35316400-35320200 Weak transcription Rectal Mucosa Donor 31 rectum
31 chr6:35316400-35320400 Weak transcription Colon Smooth Muscle Colon
32 chr6:35316600-35320200 Weak transcription Rectal Smooth Muscle rectum
33 chr6:35316600-35320600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr6:35316600-35323200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr6:35316600-35324800 Strong transcription Fetal Muscle Leg muscle
36 chr6:35316800-35320200 Weak transcription NHEK skin
37 chr6:35316800-35320400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr6:35316800-35320400 Weak transcription Spleen Spleen
39 chr6:35316800-35320400 Weak transcription HUVEC blood vessel
40 chr6:35316800-35320400 Weak transcription K562 blood
41 chr6:35316800-35320800 Genic enhancers Primary T cells fromperipheralblood blood
42 chr6:35316800-35323800 Weak transcription Pancreas Pancrea
43 chr6:35316800-35324000 Weak transcription Aorta Aorta
44 chr6:35316800-35326800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr6:35316800-35327000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
46 chr6:35316800-35327200 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr6:35316800-35330000 Strong transcription Fetal Intestine Small intestine
48 chr6:35317000-35320400 Weak transcription Duodenum Smooth Muscle Duodenum
49 chr6:35317200-35320400 Weak transcription Right Ventricle heart
50 chr6:35317400-35320400 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015