The 2.0 version of rSNPBase

Variant report

Variant rs45614138
Chromosome Location chr6:35426791-35426792
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35421000-35427200 Weak transcription Thymus Thymus
2 chr6:35421000-35435400 Weak transcription Colon Smooth Muscle Colon
3 chr6:35421200-35435200 Weak transcription Brain Angular Gyrus brain
4 chr6:35421200-35435400 Weak transcription Brain Anterior Caudate brain
5 chr6:35421400-35435400 Weak transcription Colonic Mucosa Colon
6 chr6:35421400-35435400 Weak transcription Fetal Kidney kidney
7 chr6:35421400-35435400 Weak transcription Pancreas Pancrea
8 chr6:35421600-35427200 Weak transcription Primary T helper cells PMA-I stimulated --
9 chr6:35421600-35433800 Weak transcription HUVEC blood vessel
10 chr6:35421600-35435200 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr6:35421600-35435200 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr6:35421600-35435400 Weak transcription A549 lung
13 chr6:35421600-35435400 Weak transcription NH-A brain
14 chr6:35421800-35431000 Weak transcription Liver Liver
15 chr6:35422000-35427000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr6:35422000-35430200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
17 chr6:35422200-35435200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr6:35422200-35435400 Weak transcription Small Intestine intestine
19 chr6:35422400-35427000 Weak transcription GM12878-XiMat blood
20 chr6:35422400-35430200 Weak transcription HSMM muscle
21 chr6:35422400-35434800 Strong transcription Fetal Intestine Small intestine
22 chr6:35422600-35427600 Strong transcription HepG2 liver
23 chr6:35422600-35429200 Strong transcription Dnd41 blood
24 chr6:35422600-35435400 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr6:35422800-35426800 Weak transcription Osteobl bone
26 chr6:35422800-35427000 Weak transcription Muscle Satellite Cultured Cells --
27 chr6:35422800-35427000 Weak transcription HSMMtube muscle
28 chr6:35422800-35427200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr6:35422800-35431000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:35422800-35434800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr6:35422800-35434800 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr6:35422800-35435200 Weak transcription Fetal Thymus thymus
33 chr6:35422800-35435400 Weak transcription Fetal Brain Male brain
34 chr6:35422800-35435600 Weak transcription Right Atrium heart
35 chr6:35423000-35427200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:35423000-35428400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr6:35423000-35428600 Strong transcription HUES48 Cell Line embryonic stem cell
38 chr6:35423000-35435200 Weak transcription Fetal Heart heart
39 chr6:35423000-35435200 Strong transcription Fetal Stomach stomach
40 chr6:35423000-35435400 Weak transcription NHDF-Ad bronchial
41 chr6:35423200-35427200 Weak transcription Brain Cingulate Gyrus brain
42 chr6:35423200-35429200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr6:35423200-35432200 Strong transcription Fetal Adrenal Gland Adrenal Gland
44 chr6:35423200-35435200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr6:35423400-35426800 Strong transcription Fetal Muscle Leg muscle
46 chr6:35423400-35427200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr6:35423400-35428000 Strong transcription Primary B cells from peripheral blood blood
48 chr6:35423400-35428000 Strong transcription Primary T cells fromperipheralblood blood
49 chr6:35423400-35428000 Strong transcription Gastric stomach
50 chr6:35423400-35428400 Genic enhancers Placenta Placenta

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Last update: Aug 31, 2015