The 2.0 version of rSNPBase

Variant report

Variant rs9462080
Chromosome Location chr6:35367082-35367083
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35338400-35378400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr6:35345600-35378400 Weak transcription Aorta Aorta
3 chr6:35354000-35372400 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr6:35359600-35369200 Weak transcription Fetal Kidney kidney
5 chr6:35359800-35378800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr6:35360000-35378200 Weak transcription Colon Smooth Muscle Colon
7 chr6:35360000-35378400 Weak transcription HSMMtube muscle
8 chr6:35360000-35379000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr6:35360000-35382600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr6:35360400-35372000 Weak transcription Brain Angular Gyrus brain
11 chr6:35360400-35372200 Weak transcription Brain Hippocampus Middle brain
12 chr6:35360600-35372400 Weak transcription Brain Anterior Caudate brain
13 chr6:35360600-35378600 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr6:35360800-35367800 Weak transcription Liver Liver
15 chr6:35361000-35378000 Weak transcription Stomach Smooth Muscle stomach
16 chr6:35361000-35378600 Weak transcription Adipose Nuclei Adipose
17 chr6:35361000-35378600 Weak transcription NHLF lung
18 chr6:35361000-35378800 Weak transcription Psoas Muscle Psoas
19 chr6:35361200-35376200 Weak transcription Fetal Muscle Trunk muscle
20 chr6:35361200-35378600 Weak transcription Rectal Smooth Muscle rectum
21 chr6:35361400-35367800 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr6:35361800-35367800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr6:35361800-35385800 Weak transcription Small Intestine intestine
24 chr6:35362000-35368800 Weak transcription Right Ventricle heart
25 chr6:35362000-35378000 Weak transcription Spleen Spleen
26 chr6:35362200-35367800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr6:35362200-35368600 Weak transcription Lung lung
28 chr6:35362200-35378400 Weak transcription Primary B cells from cord blood blood
29 chr6:35362200-35378400 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr6:35362200-35380000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr6:35362600-35368800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr6:35362800-35368000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
33 chr6:35362800-35370200 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr6:35363000-35369200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr6:35363400-35378200 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr6:35363600-35369000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr6:35363800-35368000 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr6:35363800-35371600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr6:35364000-35378000 Weak transcription Primary B cells from peripheral blood blood
40 chr6:35365000-35368600 Weak transcription HSMM muscle
41 chr6:35365200-35368000 Weak transcription Pancreas Pancrea
42 chr6:35365200-35368200 Weak transcription Placenta Amnion Placenta Amnion
43 chr6:35365200-35368600 Weak transcription HepG2 liver
44 chr6:35365400-35367800 Weak transcription Primary T cells from cord blood blood
45 chr6:35365400-35368200 Weak transcription Stomach Mucosa stomach
46 chr6:35365400-35368600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr6:35365400-35368600 Weak transcription NH-A brain
48 chr6:35365400-35368800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr6:35365400-35368800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr6:35365400-35375800 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015