The 2.0 version of rSNPBase

Variant report

Variant rs57634040
Chromosome Location chr6:35540315-35540316
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35530600-35543200 Weak transcription iPS-18 Cell Line embryonic stem cell
2 chr6:35533600-35563800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr6:35534400-35540400 Weak transcription Adipose Nuclei Adipose
4 chr6:35534400-35541200 Weak transcription Colon Smooth Muscle Colon
5 chr6:35534400-35569000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:35534800-35540400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr6:35534800-35544600 Weak transcription H1 Cell Line embryonic stem cell
8 chr6:35535000-35554200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr6:35535000-35564600 Weak transcription H9 Cell Line embryonic stem cell
10 chr6:35535200-35543400 Weak transcription HSMMtube muscle
11 chr6:35535400-35540400 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr6:35535600-35541200 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr6:35535600-35541600 Weak transcription Primary T cells fromperipheralblood blood
14 chr6:35535800-35541400 Weak transcription K562 blood
15 chr6:35535800-35541600 Weak transcription Ovary ovary
16 chr6:35535800-35541600 Weak transcription HepG2 liver
17 chr6:35536200-35542200 Weak transcription Brain Hippocampus Middle brain
18 chr6:35536800-35540400 Weak transcription Primary T helper cells PMA-I stimulated --
19 chr6:35537000-35541600 Weak transcription Brain Cingulate Gyrus brain
20 chr6:35537000-35541600 Weak transcription Right Ventricle heart
21 chr6:35537000-35543000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr6:35537000-35543200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr6:35537200-35541400 Weak transcription Gastric stomach
24 chr6:35537200-35541400 Weak transcription NHEK skin
25 chr6:35537400-35541400 Weak transcription Primary T regulatory cells fromperipheralblood blood
26 chr6:35537400-35543000 Weak transcription Fetal Muscle Trunk muscle
27 chr6:35537800-35542000 Weak transcription HUVEC blood vessel
28 chr6:35538000-35540600 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr6:35538200-35540800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:35538200-35541600 Weak transcription Pancreas Pancrea
31 chr6:35538200-35545000 Strong transcription Muscle Satellite Cultured Cells --
32 chr6:35538400-35541600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
33 chr6:35538400-35541600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr6:35538400-35541600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr6:35538400-35541600 Weak transcription Psoas Muscle Psoas
36 chr6:35538400-35551800 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr6:35538600-35540400 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr6:35538600-35551600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr6:35538800-35540400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr6:35538800-35540400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr6:35538800-35540400 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr6:35538800-35540400 Weak transcription Brain Substantia Nigra brain
43 chr6:35538800-35541000 Strong transcription Lung lung
44 chr6:35538800-35548200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr6:35539000-35542000 Weak transcription Primary hematopoietic stem cells blood
46 chr6:35539000-35542200 Weak transcription Primary B cells from peripheral blood blood
47 chr6:35539000-35542200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr6:35539000-35542200 Weak transcription Fetal Muscle Leg muscle
49 chr6:35539000-35542600 Weak transcription Placenta Amnion Placenta Amnion
50 chr6:35539000-35545200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015