The 2.0 version of rSNPBase

Variant report

Variant rs7758125
Chromosome Location chr6:35360009-35360010
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35338400-35378400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr6:35345600-35378400 Weak transcription Aorta Aorta
3 chr6:35351000-35360200 Weak transcription Primary B cells from peripheral blood blood
4 chr6:35351000-35360800 Weak transcription Primary B cells from cord blood blood
5 chr6:35351000-35363400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr6:35354000-35360800 Weak transcription Fetal Thymus thymus
7 chr6:35354000-35372400 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr6:35355000-35364800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr6:35356200-35361000 Weak transcription GM12878-XiMat blood
10 chr6:35357600-35362800 Enhancers Primary T helper cells fromperipheralblood blood
11 chr6:35357800-35362800 Enhancers Primary T helper cells PMA-I stimulated --
12 chr6:35358000-35362800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr6:35358000-35363400 Enhancers HUVEC blood vessel
14 chr6:35358200-35360200 Weak transcription Fetal Intestine Large intestine
15 chr6:35358400-35362800 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr6:35358400-35363000 Enhancers Primary T cells fromperipheralblood blood
17 chr6:35358600-35361000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr6:35358600-35361000 Enhancers NHLF lung
19 chr6:35358600-35362000 Enhancers Breast Myoepithelial Primary Cells Breast
20 chr6:35358800-35361000 Enhancers Skeletal Muscle Female skeletal muscle
21 chr6:35359000-35360600 Enhancers Brain Inferior Temporal Lobe brain
22 chr6:35359000-35360600 Enhancers Stomach Mucosa stomach
23 chr6:35359000-35361400 Enhancers Skeletal Muscle Male skeletal muscle
24 chr6:35359000-35362200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr6:35359200-35360200 Enhancers Brain Cingulate Gyrus brain
26 chr6:35359200-35360200 Enhancers Esophagus oesophagus
27 chr6:35359200-35360400 Enhancers Brain Hippocampus Middle brain
28 chr6:35359200-35360600 Enhancers Brain Anterior Caudate brain
29 chr6:35359200-35360600 Enhancers Duodenum Smooth Muscle Duodenum
30 chr6:35359200-35360800 Enhancers Fetal Lung lung
31 chr6:35359200-35361000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr6:35359200-35361000 Enhancers Right Atrium heart
33 chr6:35359200-35361200 Enhancers Pancreas Pancrea
34 chr6:35359200-35361400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
35 chr6:35359200-35361400 Enhancers Brain Substantia Nigra brain
36 chr6:35359200-35361600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr6:35359200-35361600 Enhancers Lung lung
38 chr6:35359200-35361800 Enhancers Gastric stomach
39 chr6:35359200-35361800 Enhancers Sigmoid Colon Sigmoid Colon
40 chr6:35359200-35362000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr6:35359200-35362200 Genic enhancers Primary T cells from cord blood blood
42 chr6:35359200-35362200 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr6:35359200-35362600 Enhancers Primary T helper 17 cells PMA-I stimulated --
44 chr6:35359400-35360600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr6:35359400-35360600 Enhancers Right Ventricle heart
46 chr6:35359400-35360800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr6:35359400-35360800 Enhancers Liver Liver
48 chr6:35359400-35361000 Flanking Active TSS NHEK skin
49 chr6:35359400-35361200 Enhancers Placenta Amnion Placenta Amnion
50 chr6:35359400-35361800 Enhancers Small Intestine intestine

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Last update: Aug 31, 2015