Variant report

Variant	rs41270080
Chromosome Location	chr6:35542045-35542046
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:35436061..35438654-chr6:35541644..35543807,2	K562	blood:
2	chr6:35536758..35539920-chr6:35540719..35543186,4	K562	blood:
3	chr6:35536071..35538338-chr6:35539087..35542599,4	K562	blood:
4	chr6:35541842..35544127-chr6:35545380..35547353,2	K562	blood:

Variant related genes	Relation type
ENSG00000198755	Chromatin interaction

Extended variants
information (count: 161 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:113)

rs_ID	r²[population]
rs10947553	1.00[ASN][1000 genomes]
rs11961458	0.93[EUR][1000 genomes]
rs11961482	0.93[EUR][1000 genomes]
rs11962885	0.93[EUR][1000 genomes]
rs11963387	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11963864	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11965291	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11966198	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11966436	0.93[EUR][1000 genomes]
rs12110366	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13340463	0.93[EUR][1000 genomes]
rs1475774	0.93[EUR][1000 genomes]
rs16878591	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16878806	0.96[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879318	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16879378	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2092427	0.93[EUR][1000 genomes]
rs28675670	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34866878	0.96[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45484291	1.00[ASN][1000 genomes]
rs45492197	1.00[ASN][1000 genomes]
rs45532932	1.00[ASN][1000 genomes]
rs45586932	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45614138	1.00[ASN][1000 genomes]
rs4713908	0.93[EUR][1000 genomes]
rs55832955	0.93[EUR][1000 genomes]
rs56002954	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56093109	1.00[ASN][1000 genomes]
rs56216330	1.00[EUR][1000 genomes]
rs57364044	1.00[ASN][1000 genomes]
rs57599664	1.00[ASN][1000 genomes]
rs57634040	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58580399	1.00[ASN][1000 genomes]
rs58873316	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59320339	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59595954	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60156710	1.00[ASN][1000 genomes]
rs60279048	0.93[EUR][1000 genomes]
rs60352056	0.93[EUR][1000 genomes]
rs60645405	0.93[EUR][1000 genomes]
rs61024208	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61188051	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61731466	1.00[ASN][1000 genomes]
rs61734569	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6457849	1.00[ASN][1000 genomes]
rs6909690	0.93[EUR][1000 genomes]
rs6910435	0.87[EUR][1000 genomes]
rs6913026	1.00[ASN][1000 genomes]
rs6917735	0.93[EUR][1000 genomes]
rs6917895	0.93[EUR][1000 genomes]
rs6917988	0.93[EUR][1000 genomes]
rs6925456	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6932821	0.93[EUR][1000 genomes]
rs6932968	0.93[EUR][1000 genomes]
rs6933159	0.93[EUR][1000 genomes]
rs6936165	1.00[ASN][1000 genomes]
rs6937483	1.00[ASN][1000 genomes]
rs6940708	1.00[ASN][1000 genomes]
rs6940722	1.00[ASN][1000 genomes]
rs6941244	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73413737	1.00[ASN][1000 genomes]
rs73421726	1.00[ASN][1000 genomes]
rs73729766	1.00[ASN][1000 genomes]
rs73746465	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746467	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746471	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746473	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746475	0.93[EUR][1000 genomes]
rs73746476	0.93[EUR][1000 genomes]
rs73746477	0.93[EUR][1000 genomes]
rs73746478	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746480	0.93[EUR][1000 genomes]
rs73746481	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746483	0.93[EUR][1000 genomes]
rs73746484	0.93[EUR][1000 genomes]
rs73746485	0.93[EUR][1000 genomes]
rs73746488	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746490	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746491	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746493	1.00[ASN][1000 genomes]
rs73746494	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746495	0.94[AFR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746498	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73746499	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73748203	0.91[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73748204	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73748205	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73748206	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73748209	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73748211	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73748220	0.93[EUR][1000 genomes]
rs73748221	0.93[EUR][1000 genomes]
rs7743425	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7745231	1.00[ASN][1000 genomes]
rs7747121	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7752084	0.93[EUR][1000 genomes]
rs7754530	1.00[ASN][1000 genomes]
rs7755021	1.00[ASN][1000 genomes]
rs7755974	1.00[ASN][1000 genomes]
rs7757196	1.00[ASN][1000 genomes]
rs7758125	1.00[ASN][1000 genomes]
rs7768163	1.00[ASN][1000 genomes]
rs7771722	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7775702	1.00[ASN][1000 genomes]
rs7775879	1.00[ASN][1000 genomes]
rs7776232	1.00[ASN][1000 genomes]
rs9462080	1.00[ASN][1000 genomes]
rs9470018	1.00[ASN][1000 genomes]
rs9658118	1.00[ASN][1000 genomes]
rs9658126	1.00[ASN][1000 genomes]
rs9658136	1.00[ASN][1000 genomes]
rs9658141	1.00[ASN][1000 genomes]
rs9767565	0.87[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:48 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758048	chr6:35463741-35806504	Genic enhancers Weak transcription Active TSS Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
2	esv2759420	chr6:35463741-35806504	Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
3	esv2761067	chr6:35471246-35573245	Weak transcription Genic enhancers Strong transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
4	nsv1022435	chr6:35476562-35556141	Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
5	nsv1034786	chr6:35476562-35564799	Genic enhancers Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
6	nsv1031987	chr6:35476562-35579375	Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
7	nsv1028302	chr6:35480914-35542591	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
8	nsv538197	chr6:35480914-35542591	Weak transcription Bivalent Enhancer Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
9	nsv1024680	chr6:35480914-35555596	Enhancers Weak transcription Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
10	nsv538198	chr6:35480914-35555596	Enhancers Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
11	nsv1032973	chr6:35481880-35564799	Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
12	nsv7889	chr6:35495503-35566388	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
13	esv3692893	chr6:35498098-35565422	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
14	nsv1021290	chr6:35501804-35555735	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
15	nsv538199	chr6:35501804-35555735	Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
16	nsv1029827	chr6:35502004-35555596	Enhancers Weak transcription Bivalent Enhancer Genic enhancers Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
17	nsv538200	chr6:35502004-35555596	Weak transcription Strong transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
18	nsv462910	chr6:35502202-35555183	Weak transcription Strong transcription Genic enhancers Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
19	nsv602921	chr6:35502202-35555183	Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
20	nsv462911	chr6:35502202-35562640	Strong transcription Weak transcription Bivalent Enhancer Enhancers Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
21	nsv462912	chr6:35502202-35562640	Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
22	nsv470813	chr6:35502202-35562640	Strong transcription Enhancers Weak transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
23	nsv602922	chr6:35502202-35562640	Enhancers Genic enhancers Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
24	nsv818412	chr6:35502202-35562640	Strong transcription Weak transcription Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
25	nsv462913	chr6:35502202-35592744	Enhancers Genic enhancers ZNF genes & repeats Strong transcription Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
26	nsv602923	chr6:35502202-35592744	Enhancers Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
27	nsv517211	chr6:35502202-35607571	Enhancers Weak transcription Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
28	nsv1030879	chr6:35502604-35562152	Weak transcription Enhancers ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
29	nsv1026252	chr6:35502604-35564799	Weak transcription Enhancers Strong transcription Genic enhancers Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
30	nsv1026532	chr6:35502604-35568562	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
31	nsv1021675	chr6:35502604-35569281	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
32	nsv1023091	chr6:35502604-35573233	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
33	nsv1017480	chr6:35502647-35560865	Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
34	nsv1030461	chr6:35504136-35558710	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
35	nsv1034413	chr6:35504136-35564799	Weak transcription Active TSS Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
36	nsv1021841	chr6:35505311-35562152	Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
37	nsv1020720	chr6:35505311-35564799	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
38	esv2421382	chr6:35505311-35564811	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
39	nsv441992	chr6:35505311-35564811	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
40	nsv1017625	chr6:35505311-35576552	Transcr. at gene 5' and 3' Strong transcription Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
41	nsv1019593	chr6:35505311-35579375	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
42	nsv602924	chr6:35505311-35750299	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
43	nsv1028721	chr6:35506731-35564799	Weak transcription Strong transcription Genic enhancers Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
44	nsv1022049	chr6:35506731-35576552	Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
45	nsv1028396	chr6:35507179-35564799	Strong transcription Enhancers Weak transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
46	nsv1026200	chr6:35507179-35568562	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
47	nsv1025296	chr6:35507179-35579375	Enhancers Genic enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
48	nsv885801	chr6:35537406-35671651	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:107 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:35530600-35543200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
2	chr6:35533600-35563800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr6:35534400-35569000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr6:35534800-35544600	Weak transcription	H1 Cell Line	embryonic stem cell
5	chr6:35535000-35554200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr6:35535000-35564600	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr6:35535200-35543400	Weak transcription	HSMMtube	muscle
8	chr6:35536200-35542200	Weak transcription	Brain Hippocampus Middle	brain
9	chr6:35537000-35543000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr6:35537000-35543200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr6:35537400-35543000	Weak transcription	Fetal Muscle Trunk	muscle
12	chr6:35538200-35545000	Strong transcription	Muscle Satellite Cultured Cells	--
13	chr6:35538400-35551800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr6:35538600-35551600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr6:35538800-35548200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr6:35539000-35542200	Weak transcription	Primary B cells from peripheral blood	blood
17	chr6:35539000-35542200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr6:35539000-35542200	Weak transcription	Fetal Muscle Leg	muscle
19	chr6:35539000-35542600	Weak transcription	Placenta Amnion	Placenta Amnion
20	chr6:35539000-35545200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr6:35539000-35551800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
22	chr6:35539000-35551800	Strong transcription	Thymus	Thymus
23	chr6:35539000-35553400	Weak transcription	Osteobl	bone
24	chr6:35539200-35542200	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr6:35539200-35545000	Strong transcription	HSMM	muscle
26	chr6:35539200-35546000	Strong transcription	HMEC	breast
27	chr6:35539200-35548200	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
28	chr6:35539200-35548200	Strong transcription	Sigmoid Colon	Sigmoid Colon
29	chr6:35539200-35548400	Strong transcription	Stomach Smooth Muscle	stomach
30	chr6:35539200-35549600	Strong transcription	Left Ventricle	heart
31	chr6:35539200-35551000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr6:35539200-35552000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
33	chr6:35539400-35542400	Genic enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr6:35539400-35545800	Strong transcription	Primary T cells from cord blood	blood
35	chr6:35539400-35553400	Strong transcription	Monocytes-CD14+_RO01746	blood
36	chr6:35539600-35545000	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr6:35539800-35545000	Strong transcription	Primary T killer naive cells fromperipheralblood	blood
38	chr6:35539800-35545000	Strong transcription	Brain Anterior Caudate	brain
39	chr6:35539800-35545000	Strong transcription	Brain Inferior Temporal Lobe	brain
40	chr6:35539800-35549400	Strong transcription	Fetal Thymus	thymus
41	chr6:35539800-35551200	Strong transcription	Esophagus	oesophagus
42	chr6:35539800-35551800	Strong transcription	Primary hematopoietic stem cells short term culture	blood
43	chr6:35539800-35568400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
44	chr6:35540000-35543200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr6:35540000-35546800	Strong transcription	GM12878-XiMat	blood
46	chr6:35540000-35550600	Strong transcription	Primary neutrophils fromperipheralblood	blood
47	chr6:35540000-35551200	Strong transcription	Primary monocytes fromperipheralblood	blood
48	chr6:35540200-35542200	Weak transcription	HUES64 Cell Line	embryonic stem cell
49	chr6:35540200-35542200	Weak transcription	Primary B cells from cord blood	blood
50	chr6:35540200-35544600	Strong transcription	Duodenum Mucosa	Duodenum

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