Variant report
| Variant | rs16879318 |
|---|---|
| Chromosome Location | chr6:35590391-35590392 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:35545000-35601800 | Weak transcription | Fetal Intestine Small | intestine |
| 2 | chr6:35569400-35591600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 3 | chr6:35570200-35608600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 4 | chr6:35570800-35611400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 5 | chr6:35571000-35590600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 6 | chr6:35571000-35602400 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 7 | chr6:35571200-35611800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 8 | chr6:35574800-35607200 | Weak transcription | Hela-S3 | cervix |
| 9 | chr6:35575000-35611600 | Strong transcription | Liver | Liver |
| 10 | chr6:35575200-35592800 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr6:35575600-35610400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 12 | chr6:35577000-35592800 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 13 | chr6:35577400-35592800 | Strong transcription | HSMM | muscle |
| 14 | chr6:35577400-35593000 | Strong transcription | Fetal Thymus | thymus |
| 15 | chr6:35577400-35595200 | Strong transcription | Left Ventricle | heart |
| 16 | chr6:35577600-35613200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 17 | chr6:35578800-35592000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 18 | chr6:35578800-35592800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 19 | chr6:35579200-35597200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 20 | chr6:35579400-35601400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 21 | chr6:35579400-35603000 | Weak transcription | HSMMtube | muscle |
| 22 | chr6:35579400-35603600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 23 | chr6:35579400-35603800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 24 | chr6:35579600-35593000 | Strong transcription | Stomach Smooth Muscle | stomach |
| 25 | chr6:35579600-35604000 | Weak transcription | Osteobl | bone |
| 26 | chr6:35579800-35592000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 27 | chr6:35579800-35593400 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 28 | chr6:35580200-35602000 | Weak transcription | Fetal Intestine Large | intestine |
| 29 | chr6:35583200-35608000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 30 | chr6:35584200-35607600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 31 | chr6:35584600-35592800 | Strong transcription | Sigmoid Colon | Sigmoid Colon |
| 32 | chr6:35585000-35592200 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 33 | chr6:35585200-35592800 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 34 | chr6:35585600-35610800 | Weak transcription | Fetal Muscle Leg | muscle |
| 35 | chr6:35585800-35607800 | Weak transcription | Colon Smooth Muscle | Colon |
| 36 | chr6:35586400-35606200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 37 | chr6:35586800-35603000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr6:35586800-35606000 | Weak transcription | Primary B cells from cord blood | blood |
| 39 | chr6:35586800-35613800 | Weak transcription | Fetal Stomach | stomach |
| 40 | chr6:35587000-35590600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 41 | chr6:35587000-35594600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 42 | chr6:35587000-35607800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 43 | chr6:35587000-35607800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 44 | chr6:35587200-35606400 | Weak transcription | Small Intestine | intestine |
| 45 | chr6:35587800-35591600 | Weak transcription | Right Ventricle | heart |
| 46 | chr6:35587800-35603800 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 47 | chr6:35588000-35590400 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 48 | chr6:35588000-35591400 | Weak transcription | Esophagus | oesophagus |
| 49 | chr6:35588000-35591400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 50 | chr6:35588000-35591600 | Weak transcription | Duodenum Mucosa | Duodenum |
