The 2.0 version of rSNPBase

Variant report

Variant rs6937483
Chromosome Location chr6:35350759-35350760
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:35329000-35350800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr6:35331200-35350800 Weak transcription H9 Cell Line embryonic stem cell
3 chr6:35338200-35356400 Weak transcription Pancreas Pancrea
4 chr6:35338400-35350800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr6:35338400-35378400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr6:35338600-35359400 Weak transcription Placenta Amnion Placenta Amnion
7 chr6:35338800-35353400 Weak transcription Fetal Muscle Trunk muscle
8 chr6:35339000-35351000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr6:35339200-35353400 Weak transcription Left Ventricle heart
10 chr6:35339200-35353400 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr6:35339200-35356600 Weak transcription Esophagus oesophagus
12 chr6:35339400-35350800 Weak transcription Right Atrium heart
13 chr6:35339400-35353600 Weak transcription Small Intestine intestine
14 chr6:35339600-35350800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr6:35339600-35350800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr6:35339600-35350800 Weak transcription Colonic Mucosa Colon
17 chr6:35339600-35353400 Weak transcription HMEC breast
18 chr6:35339600-35353600 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr6:35339600-35357800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:35339800-35354800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:35340000-35357600 Weak transcription Primary T helper cells fromperipheralblood blood
22 chr6:35340400-35350800 Weak transcription Spleen Spleen
23 chr6:35340600-35359400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr6:35341800-35354600 Weak transcription NHEK skin
25 chr6:35342000-35353400 Weak transcription Fetal Muscle Leg muscle
26 chr6:35344400-35358000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr6:35345000-35351000 Strong transcription Primary T cells from cord blood blood
28 chr6:35345200-35353600 Weak transcription Colon Smooth Muscle Colon
29 chr6:35345200-35355800 Weak transcription GM12878-XiMat blood
30 chr6:35345600-35353400 Weak transcription Fetal Stomach stomach
31 chr6:35345600-35353400 Weak transcription HepG2 liver
32 chr6:35345600-35353600 Weak transcription Fetal Lung lung
33 chr6:35345600-35353800 Weak transcription Rectal Smooth Muscle rectum
34 chr6:35345600-35378400 Weak transcription Aorta Aorta
35 chr6:35345800-35353400 Weak transcription Ovary ovary
36 chr6:35346200-35359200 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr6:35346200-35359800 Weak transcription Stomach Smooth Muscle stomach
38 chr6:35346400-35353600 Weak transcription Brain Anterior Caudate brain
39 chr6:35346600-35350800 Weak transcription Primary T cells fromperipheralblood blood
40 chr6:35346600-35353400 Weak transcription Brain Hippocampus Middle brain
41 chr6:35346800-35353400 Weak transcription Brain Inferior Temporal Lobe brain
42 chr6:35347400-35357600 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr6:35347600-35359200 Weak transcription Brain Angular Gyrus brain
44 chr6:35347600-35359200 Weak transcription Brain Substantia Nigra brain
45 chr6:35347800-35351200 Strong transcription Primary T helper naive cells fromperipheralblood blood
46 chr6:35348000-35353600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
47 chr6:35348400-35351200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
48 chr6:35348600-35350800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr6:35349200-35350800 Weak transcription HSMMtube muscle
50 chr6:35349400-35350800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015