Variant report

Variant	rs7810806
Chromosome Location	chr7:22246954-22246955
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10282106	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10282222	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11763898	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11766435	0.89[CEU][hapmap]
rs11766861	0.89[CEU][hapmap]
rs12530484	1.00[CEU][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12700363	0.89[CEU][hapmap]
rs12700364	0.89[CEU][hapmap]
rs1345251	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1419765	0.89[CEU][hapmap]
rs17146373	1.00[YRI][hapmap]
rs17773555	0.86[CEU][hapmap]
rs2079478	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs3813383	0.86[TSI][hapmap]
rs4722108	1.00[CEU][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4722110	1.00[CEU][hapmap];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6944433	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6947617	0.88[YRI][hapmap]
rs6960229	0.89[EUR][1000 genomes]
rs6964294	0.88[YRI][hapmap]
rs6965394	0.89[CEU][hapmap];1.00[TSI][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs73683318	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7794194	0.82[ASW][hapmap];1.00[YRI][hapmap]
rs7803094	0.89[CEU][hapmap]
rs9886139	1.00[CEU][hapmap];0.89[EUR][1000 genomes]

No data

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:22214400-22247400	Weak transcription	HUVEC	blood vessel
2	chr7:22225400-22253600	Weak transcription	Stomach Mucosa	stomach
3	chr7:22233400-22247600	Weak transcription	Psoas Muscle	Psoas
4	chr7:22233400-22259200	Weak transcription	Rectal Smooth Muscle	rectum
5	chr7:22233600-22247600	Weak transcription	Right Ventricle	heart
6	chr7:22233600-22253600	Weak transcription	Esophagus	oesophagus
7	chr7:22233600-22257000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr7:22233800-22247400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr7:22233800-22247400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr7:22235600-22253800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr7:22235600-22260600	Weak transcription	GM12878-XiMat	blood
12	chr7:22236400-22249200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr7:22238000-22264600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
14	chr7:22238800-22253600	Weak transcription	HUES48 Cell Line	embryonic stem cell
15	chr7:22239600-22251000	Weak transcription	Adipose Nuclei	Adipose
16	chr7:22241000-22247000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr7:22241000-22267800	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr7:22242000-22247600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr7:22243200-22247600	Weak transcription	Aorta	Aorta
20	chr7:22243400-22255800	Weak transcription	Liver	Liver
21	chr7:22243400-22307200	Weak transcription	Thymus	Thymus
22	chr7:22243600-22247600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr7:22243600-22248000	Weak transcription	Skeletal Muscle Male	skeletal muscle
24	chr7:22243600-22248400	Weak transcription	Spleen	Spleen
25	chr7:22243600-22251400	Weak transcription	Lung	lung
26	chr7:22243600-22256600	Weak transcription	Rectal Mucosa Donor 29	rectum
27	chr7:22243600-22258400	Weak transcription	Fetal Intestine Small	intestine
28	chr7:22244200-22251200	Weak transcription	Pancreas	Pancrea
29	chr7:22244200-22258000	Weak transcription	Fetal Intestine Large	intestine
30	chr7:22244200-22258400	Weak transcription	Duodenum Mucosa	Duodenum
31	chr7:22244200-22258600	Weak transcription	Rectal Mucosa Donor 31	rectum
32	chr7:22244400-22247600	Weak transcription	Brain Cingulate Gyrus	brain
33	chr7:22244400-22247600	Weak transcription	Duodenum Smooth Muscle	Duodenum
34	chr7:22244400-22247600	Weak transcription	Right Atrium	heart
35	chr7:22244400-22248400	Weak transcription	Fetal Thymus	thymus
36	chr7:22244600-22247000	Weak transcription	NHEK	skin
37	chr7:22244600-22258000	Weak transcription	Primary B cells from cord blood	blood
38	chr7:22244600-22259800	Weak transcription	Colon Smooth Muscle	Colon
39	chr7:22244800-22247600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
40	chr7:22244800-22256800	Weak transcription	Fetal Muscle Leg	muscle
41	chr7:22245200-22247600	Weak transcription	Brain Substantia Nigra	brain
42	chr7:22245400-22247400	Weak transcription	Brain Hippocampus Middle	brain
43	chr7:22245600-22247400	Weak transcription	HepG2	liver
44	chr7:22245600-22247800	Weak transcription	Brain Inferior Temporal Lobe	brain
45	chr7:22245600-22248000	Weak transcription	Brain Angular Gyrus	brain
46	chr7:22245800-22250400	Weak transcription	Fetal Lung	lung
47	chr7:22245800-22252600	Weak transcription	Fetal Kidney	kidney
48	chr7:22246000-22248000	Weak transcription	Brain Anterior Caudate	brain
49	chr7:22246000-22248800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr7:22246400-22247600	Weak transcription	Left Ventricle	heart

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