Variant report

Variant	rs7833621
Chromosome Location	chr8:59898031-59898032
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10088954	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10093846	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10098381	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs10109219	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10504273	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs10504275	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11774625	0.87[EUR][1000 genomes]
rs11777659	0.82[EUR][1000 genomes]
rs11778333	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11779216	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11784073	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13253554	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs13273148	0.87[EUR][1000 genomes]
rs16924314	0.86[EUR][1000 genomes]
rs17241424	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs28681155	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6996574	0.82[EUR][1000 genomes]
rs7001520	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7821269	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7823862	0.98[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59887600-59903600	Weak transcription	Osteobl	bone
2	chr8:59888000-59899400	Weak transcription	H1 Cell Line	embryonic stem cell
3	chr8:59888000-59903800	Weak transcription	Fetal Stomach	stomach
4	chr8:59889800-59899800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr8:59889800-59927000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr8:59890400-59903200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr8:59891000-59916600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr8:59891200-59903800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr8:59891200-59918000	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr8:59891600-59900800	Weak transcription	Primary hematopoietic stem cells	blood
11	chr8:59891600-59903800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr8:59891800-59904200	Weak transcription	Fetal Intestine Small	intestine
13	chr8:59892400-59898800	Weak transcription	Dnd41	blood
14	chr8:59894800-59913600	Weak transcription	Small Intestine	intestine
15	chr8:59895800-59899400	Weak transcription	H9 Cell Line	embryonic stem cell
16	chr8:59895800-59903200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
17	chr8:59896000-59898800	Weak transcription	Thymus	Thymus
18	chr8:59896000-59902400	Weak transcription	Primary T cells fromperipheralblood	blood
19	chr8:59896000-59903600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr8:59896200-59903400	Weak transcription	Primary T cells from cord blood	blood
21	chr8:59896200-59903400	Weak transcription	Pancreatic Islets	Pancreatic Islet
22	chr8:59896200-59903600	Weak transcription	Right Atrium	heart
23	chr8:59896400-59903400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
24	chr8:59897800-59904400	Strong transcription	Fetal Thymus	thymus

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