Variant report

Variant	rs7001520
Chromosome Location	chr8:59888563-59888564
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10088954	0.84[EUR][1000 genomes]
rs10093846	0.84[EUR][1000 genomes]
rs10098381	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10109219	0.84[EUR][1000 genomes]
rs10504273	0.86[EUR][1000 genomes]
rs10504275	0.84[EUR][1000 genomes]
rs11774625	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11777659	0.94[EUR][1000 genomes]
rs11778333	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11779216	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11782466	0.81[EUR][1000 genomes]
rs11784073	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13253554	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs13256007	0.84[EUR][1000 genomes]
rs13273148	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16924314	0.98[EUR][1000 genomes]
rs17232411	0.84[EUR][1000 genomes]
rs17241424	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17298221	0.82[EUR][1000 genomes]
rs28681155	0.84[EUR][1000 genomes]
rs6996574	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs71521434	0.83[EUR][1000 genomes]
rs7815098	0.84[EUR][1000 genomes]
rs7821269	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7823862	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7833621	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59852600-59888600	Weak transcription	Primary hematopoietic stem cells	blood
2	chr8:59872800-59889200	Weak transcription	Duodenum Mucosa	Duodenum
3	chr8:59873600-59893200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr8:59886000-59889400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr8:59886400-59888800	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr8:59886800-59889000	Weak transcription	Fetal Thymus	thymus
7	chr8:59887000-59889200	Weak transcription	Thymus	Thymus
8	chr8:59887000-59895000	Weak transcription	NHDF-Ad	bronchial
9	chr8:59887600-59891400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr8:59887600-59903600	Weak transcription	Osteobl	bone
11	chr8:59888000-59889000	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr8:59888000-59889200	Weak transcription	Primary T cells from cord blood	blood
13	chr8:59888000-59889200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
14	chr8:59888000-59890000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr8:59888000-59893200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
16	chr8:59888000-59894000	Weak transcription	Primary T cells fromperipheralblood	blood
17	chr8:59888000-59899400	Weak transcription	H1 Cell Line	embryonic stem cell
18	chr8:59888000-59903800	Weak transcription	Fetal Stomach	stomach
19	chr8:59888200-59889000	Weak transcription	Dnd41	blood
20	chr8:59888200-59889200	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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