Variant report
Variant | rs7923171 |
---|---|
Chromosome Location | chr10:23021539-23021540 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr10:23014598..23016365-chr10:23019653..23022054,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11013098 | 0.89[ASN][1000 genomes] |
rs11013113 | 0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs11592199 | 0.89[ASN][1000 genomes] |
rs11592427 | 0.88[EUR][1000 genomes] |
rs11596218 | 0.95[ASN][1000 genomes] |
rs12255136 | 0.84[ASN][1000 genomes] |
rs12778869 | 0.95[ASN][1000 genomes] |
rs1891878 | 0.86[EUR][1000 genomes] |
rs2068496 | 0.81[EUR][1000 genomes] |
rs34032638 | 0.90[ASN][1000 genomes] |
rs34303686 | 0.95[ASN][1000 genomes] |
rs34729599 | 0.89[ASN][1000 genomes] |
rs35027263 | 0.97[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs58647212 | 0.84[ASN][1000 genomes] |
rs6482232 | 0.96[EUR][1000 genomes] |
rs6482233 | 0.88[EUR][1000 genomes] |
rs6482234 | 0.85[EUR][1000 genomes] |
rs6482235 | 0.87[EUR][1000 genomes] |
rs6482236 | 0.90[EUR][1000 genomes] |
rs7068999 | 0.82[EUR][1000 genomes] |
rs7072589 | 0.81[EUR][1000 genomes] |
rs7073783 | 0.88[EUR][1000 genomes] |
rs7082741 | 0.88[EUR][1000 genomes] |
rs7085322 | 0.82[EUR][1000 genomes] |
rs7091585 | 0.81[EUR][1000 genomes] |
rs7091875 | 0.81[EUR][1000 genomes] |
rs7092404 | 0.86[EUR][1000 genomes] |
rs7094187 | 0.82[EUR][1000 genomes] |
rs7095020 | 0.82[EUR][1000 genomes] |
rs7095326 | 0.82[EUR][1000 genomes] |
rs7097599 | 0.86[EUR][1000 genomes] |
rs7100792 | 0.87[EUR][1000 genomes] |
rs71491932 | 0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7894778 | 0.82[EUR][1000 genomes] |
rs7897908 | 0.82[EUR][1000 genomes] |
rs7915600 | 0.88[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv831809 | chr10:22918101-23069676 | Weak transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 7 gene(s) | inside rSNPs | diseases |
2 | nsv550210 | chr10:23012096-23064702 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS | Chromatin interactive region | 1 gene(s) | inside rSNPs | diseases |
3 | nsv550211 | chr10:23020350-23079385 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS | TF binding regionChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr10:23016400-23027600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
2 | chr10:23020000-23029800 | Weak transcription | Stomach Mucosa | stomach |