The 2.0 version of rSNPBase

Variant report

Variant rs8192354
Chromosome Location chr15:72521503-72521504
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:72511400-72521800 Weak transcription Liver Liver
2 chr15:72517800-72522600 Transcr. at gene 5' and 3' A549 lung
3 chr15:72518400-72521600 Enhancers Primary Natural Killer cells fromperipheralblood blood
4 chr15:72518400-72521600 Enhancers Fetal Intestine Large intestine
5 chr15:72518400-72521800 Enhancers Spleen Spleen
6 chr15:72518600-72522200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
7 chr15:72518800-72522600 Transcr. at gene 5' and 3' Dnd41 blood
8 chr15:72519000-72521800 Enhancers Sigmoid Colon Sigmoid Colon
9 chr15:72519000-72522000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr15:72519000-72522400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
11 chr15:72519200-72522000 Flanking Active TSS NHLF lung
12 chr15:72519200-72522200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr15:72519400-72521800 Weak transcription Aorta Aorta
14 chr15:72519400-72522200 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr15:72519600-72524800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr15:72520000-72522000 Flanking Active TSS HUVEC blood vessel
17 chr15:72520000-72522000 Transcr. at gene 5' and 3' K562 blood
18 chr15:72520000-72522200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
19 chr15:72520200-72521800 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr15:72520200-72522000 Flanking Active TSS Primary T cells from cord blood blood
21 chr15:72520200-72522000 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
22 chr15:72520200-72522000 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
23 chr15:72520200-72522000 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
24 chr15:72520200-72522000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
25 chr15:72520200-72522000 Flanking Active TSS Brain Germinal Matrix brain
26 chr15:72520200-72522000 Flanking Active TSS Fetal Heart heart
27 chr15:72520200-72522000 Transcr. at gene 5' and 3' Hela-S3 cervix
28 chr15:72520200-72522000 Transcr. at gene 5' and 3' HMEC breast
29 chr15:72520200-72522000 Transcr. at gene 5' and 3' NHEK skin
30 chr15:72520200-72522200 Flanking Active TSS Primary T cells fromperipheralblood blood
31 chr15:72520200-72522200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
32 chr15:72520200-72522200 Flanking Active TSS Duodenum Mucosa Duodenum
33 chr15:72520200-72522200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
34 chr15:72520200-72523400 Flanking Active TSS Primary B cells from cord blood blood
35 chr15:72520400-72521600 Transcr. at gene 5' and 3' Duodenum Smooth Muscle Duodenum
36 chr15:72520400-72522000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
37 chr15:72520400-72522000 Flanking Active TSS Fetal Brain Female brain
38 chr15:72520400-72522000 Flanking Active TSS Fetal Thymus thymus
39 chr15:72520400-72522000 Flanking Active TSS Left Ventricle heart
40 chr15:72520400-72522000 Flanking Active TSS Stomach Smooth Muscle stomach
41 chr15:72520400-72522200 Flanking Active TSS Primary monocytes fromperipheralblood blood
42 chr15:72520400-72522200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr15:72520400-72522200 Flanking Active TSS Fetal Muscle Leg muscle
44 chr15:72520600-72522000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
45 chr15:72520600-72524400 Active TSS Breast Myoepithelial Primary Cells Breast
46 chr15:72520800-72521600 Enhancers Placenta Placenta
47 chr15:72520800-72521800 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
48 chr15:72520800-72521800 Flanking Active TSS HSMMtube muscle
49 chr15:72520800-72522000 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr15:72520800-72522200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015