Variant report

Variant	rs9373390
Chromosome Location	chr6:143668277-143668278
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10872558	0.94[EUR][1000 genomes]
rs12208160	1.00[CHB][hapmap]
rs1345991	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1364650	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1559598	1.00[CHB][hapmap];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1863137	1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs1885649	1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2194655	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2216917	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs223604	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2328474	1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4895609	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4896643	0.94[EUR][1000 genomes]
rs4896644	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4896645	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4896646	0.93[EUR][1000 genomes]
rs6570555	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6901152	1.00[CHB][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6907215	1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6917403	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6930404	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6931802	1.00[CHB][hapmap]
rs7454731	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7738887	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7749040	1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7760341	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7766829	1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9373387	1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9376739	1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9376743	1.00[CHB][hapmap];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs9376745	1.00[CHB][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9403480	1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9403487	0.84[EUR][1000 genomes]
rs9496542	1.00[CHB][hapmap]
rs972152	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143642600-143675600	Weak transcription	Left Ventricle	heart
2	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
3	chr6:143654000-143672000	Weak transcription	Ovary	ovary
4	chr6:143658400-143670200	Weak transcription	NHDF-Ad	bronchial
5	chr6:143658800-143669400	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr6:143659400-143668400	Weak transcription	Fetal Intestine Small	intestine
7	chr6:143661000-143669400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr6:143662800-143675600	Weak transcription	Liver	Liver
9	chr6:143663000-143670800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr6:143667600-143669400	Weak transcription	Osteobl	bone
11	chr6:143667800-143669400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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