Variant report

Variant	rs4896645
Chromosome Location	chr6:143670379-143670380
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:143663921..143666582-chr6:143668442..143671161,2	K562	blood:
2	chr6:143665025..143666582-chr6:143668442..143670417,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10872558	0.95[EUR][1000 genomes]
rs1345991	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1364650	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1559598	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1863137	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1885649	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2194655	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2216917	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs223586	1.00[ASN][1000 genomes]
rs223604	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs223606	1.00[ASN][1000 genomes]
rs223611	1.00[ASN][1000 genomes]
rs2328474	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4895609	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4896643	0.95[EUR][1000 genomes]
rs4896644	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4896646	0.94[EUR][1000 genomes]
rs6570555	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6901152	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6907215	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6917403	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6930404	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6931802	1.00[ASN][1000 genomes]
rs7454731	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7738887	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7749040	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs7760341	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7766829	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9373387	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9373390	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9376739	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9376743	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9376745	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9403480	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs9403487	0.85[EUR][1000 genomes]
rs972152	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143642600-143675600	Weak transcription	Left Ventricle	heart
2	chr6:143645000-143683200	Weak transcription	Pancreas	Pancrea
3	chr6:143654000-143672000	Weak transcription	Ovary	ovary
4	chr6:143662800-143675600	Weak transcription	Liver	Liver
5	chr6:143663000-143670800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr6:143669400-143670400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr6:143669400-143670400	Enhancers	Muscle Satellite Cultured Cells	--
8	chr6:143669400-143670400	Enhancers	Osteobl	bone
9	chr6:143670200-143670400	Enhancers	NHDF-Ad	bronchial

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