Variant report

Variant	rs9396615
Chromosome Location	chr6:15912172-15912173
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:15910080..15912614-chr6:15921343..15923025,2	K562	blood:
2	chr6:15909137..15912614-chr6:15921343..15924377,3	K562	blood:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10484351	0.88[JPT][hapmap]
rs11966220	1.00[CEU][hapmap];0.85[JPT][hapmap];0.83[AMR][1000 genomes]
rs13208062	1.00[CEU][hapmap]
rs13211010	0.89[JPT][hapmap]
rs13218971	0.89[JPT][hapmap]
rs13220668	1.00[CEU][hapmap];0.88[JPT][hapmap]
rs17419416	0.89[JPT][hapmap]
rs1927587	0.89[JPT][hapmap]
rs34126499	0.83[AMR][1000 genomes]
rs34545176	0.83[AMR][1000 genomes]
rs35514893	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4712266	1.00[CEU][hapmap]
rs59691832	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs707840	1.00[CEU][hapmap]
rs9358074	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs9370839	1.00[CEU][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs9370841	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9370843	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9383091	1.00[CEU][hapmap];0.86[JPT][hapmap];0.83[AMR][1000 genomes]
rs9383093	1.00[CEU][hapmap]
rs9396616	1.00[CEU][hapmap]
rs9396617	1.00[CEU][hapmap]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:15897800-15912200	Weak transcription	Right Atrium	heart
2	chr6:15904800-15913600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
3	chr6:15906600-15912200	Weak transcription	Spleen	Spleen
4	chr6:15906800-15912200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr6:15907000-15912200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr6:15907000-15912200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
7	chr6:15908000-15912800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr6:15908200-15912600	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr6:15908400-15912400	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr6:15908600-15912400	Weak transcription	Primary monocytes fromperipheralblood	blood
11	chr6:15909400-15912400	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr6:15910400-15912200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr6:15911000-15912400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
14	chr6:15911400-15912200	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr6:15911400-15912400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
16	chr6:15911400-15912400	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr6:15911400-15913600	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr6:15911400-15914000	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr6:15911800-15912200	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr6:15911800-15912600	Enhancers	H9 Cell Line	embryonic stem cell
21	chr6:15911800-15912800	Enhancers	K562	blood
22	chr6:15911800-15913400	Enhancers	iPS-15b Cell Line	embryonic stem cell
23	chr6:15912000-15912200	Enhancers	Fetal Kidney	kidney
24	chr6:15912000-15912800	Enhancers	H1 Cell Line	embryonic stem cell
25	chr6:15912000-15912800	Enhancers	Adipose Nuclei	Adipose
26	chr6:15912000-15913000	Enhancers	Placenta	Placenta

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