Variant report

Variant	rs9487032
Chromosome Location	chr6:109605323-109605324
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:109604174..109607113-chr6:109618128..109619634,2	MCF-7	breast:
2	chr6:109604152..109606208-chr6:109703363..109705776,2	K562	blood:
3	chr6:109604925..109606783-chr6:109700992..109703357,2	K562	blood:
4	chr6:109596645..109598762-chr6:109604228..109605955,2	K562	blood:
5	chr6:109604413..109609020-chr6:109610779..109613527,4	K562	blood:
6	chr6:109604277..109607787-chr6:109628110..109631936,3	K562	blood:

Variant related genes	Relation type
ENSG00000203799	Chromatin interaction
ENSG00000238474	Chromatin interaction
ENSG00000260273	Chromatin interaction
ENSG00000219700	Chromatin interaction
ENSG00000135535	Chromatin interaction

Extended variants
information (count: 61 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs1111863	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1111864	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1111865	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1111866	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1320612	0.82[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13209277	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1521908	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1546722	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1915834	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs1915835	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2356817	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4403290	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4601178	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs5012479	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6568558	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6568561	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6902892	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6903695	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6910696	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6913093	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6924776	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6924815	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6927569	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6930733	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6932503	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7744284	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7748641	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7755970	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs7757347	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7772602	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7773331	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7773815	0.82[EUR][1000 genomes]
rs882072	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs882074	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9320282	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs932223	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9372211	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9374079	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9386789	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9386790	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9386791	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9386792	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9386793	0.90[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9386794	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9386797	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9398197	0.94[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9400269	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9400270	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9400271	0.94[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9480922	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9480923	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487033	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487034	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487036	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487038	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487039	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487042	0.88[AFR][1000 genomes];0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9487043	0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs9487053	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9487058	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9784763	0.88[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109587600-109614600	Weak transcription	HepG2	liver
2	chr6:109591600-109615200	Weak transcription	Placenta	Placenta
3	chr6:109603400-109606200	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr6:109605200-109607000	Enhancers	K562	blood

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