Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:67831297..67833273-chr13:67834437..67837217,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1325675	0.85[ASN][1000 genomes]
rs1325677	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1325678	0.97[ASN][1000 genomes]
rs1925750	0.84[ASN][1000 genomes]
rs1983871	0.83[ASN][1000 genomes]
rs1983949	0.82[CHB][hapmap]
rs2147998	0.82[CHB][hapmap];0.83[ASN][1000 genomes]
rs2182229	0.84[ASN][1000 genomes]
rs2325025	0.81[CHB][hapmap];0.83[ASN][1000 genomes]
rs2325027	0.81[CHB][hapmap];0.83[ASN][1000 genomes]
rs2985931	0.95[CHB][hapmap];0.88[JPT][hapmap]
rs3812859	0.86[ASN][1000 genomes]
rs3812860	0.81[CHB][hapmap];0.85[ASN][1000 genomes]
rs4097309	0.93[ASN][1000 genomes]
rs4242930	0.85[ASN][1000 genomes]
rs4614602	0.87[ASN][1000 genomes]
rs4884720	0.82[CHB][hapmap]
rs71427643	0.81[ASN][1000 genomes]
rs7489531	0.83[ASN][1000 genomes]
rs7992750	0.81[ASN][1000 genomes]
rs8002263	0.86[ASN][1000 genomes]
rs9317651	0.81[CHB][hapmap];0.81[ASN][1000 genomes]
rs9529199	0.82[CHB][hapmap]
rs9529206	0.83[ASN][1000 genomes]
rs9541034	0.83[ASN][1000 genomes]
rs9541035	0.81[CHB][hapmap];0.83[ASN][1000 genomes]
rs9541039	0.97[ASN][1000 genomes]
rs9541041	0.97[ASN][1000 genomes]
rs9571740	0.81[CHB][hapmap];0.83[ASN][1000 genomes]
rs9571745	0.86[CHB][hapmap]
rs994245	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035741	chr13:67212973-68077950	Enhancers Flanking Active TSS Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv541817	chr13:67212973-68077950	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv562140	chr13:67820503-67858550	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:67834600-67836400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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