Variant report

Variant	rs9601291
Chromosome Location	chr13:80474017-80474018
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 57 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:57)

rs_ID	r²[population]
rs1006458	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11840740	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11843138	0.87[ASN][1000 genomes]
rs12323034	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12323035	0.91[ASN][1000 genomes]
rs12583025	0.87[ASN][1000 genomes]
rs12583645	0.87[ASN][1000 genomes]
rs12861375	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12876835	0.92[ASN][1000 genomes]
rs13378771	0.81[ASN][1000 genomes]
rs1811362	0.92[ASN][1000 genomes]
rs2007276	0.80[ASN][1000 genomes]
rs2304638	0.86[ASN][1000 genomes]
rs2329003	0.86[ASN][1000 genomes]
rs34710670	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs36063327	0.86[ASN][1000 genomes]
rs3850060	0.83[EUR][1000 genomes]
rs3861143	0.88[ASN][1000 genomes]
rs3861144	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3898550	0.81[ASN][1000 genomes]
rs3898551	0.81[ASN][1000 genomes]
rs3916021	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4052505	0.86[ASN][1000 genomes]
rs4533153	0.80[ASN][1000 genomes]
rs4884141	0.80[ASN][1000 genomes]
rs4884142	0.80[ASN][1000 genomes]
rs4885680	0.85[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4885681	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4885683	0.82[ASN][1000 genomes]
rs6563150	0.86[ASN][1000 genomes]
rs7318554	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7329042	0.80[ASN][1000 genomes]
rs7329614	0.81[ASN][1000 genomes]
rs7330635	0.81[ASN][1000 genomes]
rs7332417	0.86[ASN][1000 genomes]
rs7336725	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7982819	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7995887	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7997147	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9318660	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9318662	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9318663	0.85[ASN][1000 genomes]
rs9545250	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9545261	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9545268	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9565536	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9593417	0.80[ASN][1000 genomes]
rs9593418	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9593420	0.91[ASN][1000 genomes]
rs9593421	0.88[ASN][1000 genomes]
rs9601283	0.81[ASN][1000 genomes]
rs9601288	0.82[ASN][1000 genomes]
rs9601289	0.82[ASN][1000 genomes]
rs9601290	0.82[ASN][1000 genomes]
rs9601293	0.86[ASN][1000 genomes]
rs9601294	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs996823	0.80[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:80473600-80475600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr13:80473600-80475600	Weak transcription	NHEK	skin

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