Variant report

Variant	rs1811362
Chromosome Location	chr13:80475705-80475706
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 81 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:81)

rs_ID	r²[population]
rs11838566	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11840618	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11840648	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11840740	0.93[ASN][1000 genomes]
rs11841357	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11843138	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12323034	0.98[ASN][1000 genomes]
rs12323035	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12583025	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12583645	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12585712	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12853769	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12861375	0.94[ASN][1000 genomes]
rs12867413	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12868561	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12876835	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13378771	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2007276	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2118798	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2304638	0.92[ASN][1000 genomes]
rs2329003	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2329148	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34622893	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34710670	0.82[ASN][1000 genomes]
rs36063327	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3850061	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3850062	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3850064	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3861143	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs3861144	0.84[ASN][1000 genomes]
rs3898550	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3898551	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3916021	0.88[ASN][1000 genomes]
rs4052505	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4514565	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4533153	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4884141	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4884142	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4885681	0.80[ASN][1000 genomes]
rs4885683	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55978445	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs57067871	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6563146	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6563150	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs66994466	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7318554	0.91[ASN][1000 genomes]
rs7329042	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7329614	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7330635	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7332417	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7333212	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7336725	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7982819	0.91[ASN][1000 genomes]
rs7994328	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs7995887	0.91[ASN][1000 genomes]
rs7997147	0.94[ASN][1000 genomes]
rs9318660	0.86[ASN][1000 genomes]
rs9318662	0.85[ASN][1000 genomes]
rs9318663	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9545261	0.89[ASN][1000 genomes]
rs9545268	0.90[ASN][1000 genomes]
rs9565536	0.80[ASN][1000 genomes]
rs9593417	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9593418	0.86[ASN][1000 genomes]
rs9593419	0.85[EUR][1000 genomes]
rs9593420	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9593421	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9601280	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs9601281	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9601283	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9601285	0.86[EUR][1000 genomes]
rs9601286	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9601288	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9601289	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9601290	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9601291	0.92[ASN][1000 genomes]
rs9601293	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9601294	0.91[ASN][1000 genomes]
rs9805460	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs996823	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs996824	0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:80475000-80476000	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr13:80475000-80476200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr13:80475000-80476200	Enhancers	NHDF-Ad	bronchial
4	chr13:80475200-80475800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr13:80475200-80475800	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr13:80475200-80476000	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr13:80475200-80476800	Enhancers	Brain Substantia Nigra	brain
8	chr13:80475400-80475800	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr13:80475400-80476000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr13:80475600-80475800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr13:80475600-80475800	Enhancers	Brain Hippocampus Middle	brain
12	chr13:80475600-80476000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr13:80475600-80476000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr13:80475600-80476000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr13:80475600-80476000	Active TSS	Brain Angular Gyrus	brain
16	chr13:80475600-80476000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
17	chr13:80475600-80476000	Enhancers	NHEK	skin
18	chr13:80475600-80476000	Enhancers	NHLF	lung
19	chr13:80475600-80476200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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