Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10156026	1.00[JPT][hapmap]
rs10227372	1.00[JPT][hapmap]
rs10268039	1.00[JPT][hapmap]
rs10268330	1.00[JPT][hapmap]
rs11980396	0.81[JPT][hapmap]
rs11983051	0.90[JPT][hapmap]
rs12111611	0.88[JPT][hapmap]
rs12164106	0.81[JPT][hapmap];1.00[YRI][hapmap]
rs1557778	0.81[JPT][hapmap]
rs17145316	0.90[JPT][hapmap];1.00[YRI][hapmap]
rs1963781	0.83[YRI][hapmap]
rs2014196	0.90[JPT][hapmap]
rs2158128	0.81[JPT][hapmap]
rs2285684	0.81[JPT][hapmap]
rs2390592	1.00[CEU][hapmap];0.90[JPT][hapmap];1.00[EUR][1000 genomes]
rs2390593	1.00[EUR][1000 genomes]
rs2893058	0.96[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3735523	1.00[JPT][hapmap]
rs4273751	0.81[JPT][hapmap]
rs4722054	1.00[JPT][hapmap]
rs6461598	1.00[JPT][hapmap]
rs6979777	1.00[JPT][hapmap]
rs763543	0.81[JPT][hapmap]
rs7791639	1.00[JPT][hapmap]
rs961526	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018133	chr7:21740118-22055283	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
2	nsv830922	chr7:21793386-21964675	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases
3	nsv933320	chr7:21840543-21882825	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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