Variant report

Variant	rs9816433
Chromosome Location	chr3:155835405-155835406
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11927350	0.94[EUR][1000 genomes]
rs13078030	1.00[CEU][hapmap]
rs13318658	0.94[EUR][1000 genomes]
rs1386959	0.94[EUR][1000 genomes]
rs16825729	0.94[EUR][1000 genomes]
rs16825730	0.94[EUR][1000 genomes]
rs16825750	0.94[EUR][1000 genomes]
rs57299583	0.94[EUR][1000 genomes]
rs59619851	0.94[EUR][1000 genomes]
rs59897122	0.94[EUR][1000 genomes]
rs61314882	0.94[EUR][1000 genomes]
rs6441033	0.94[EUR][1000 genomes]
rs73024639	0.94[EUR][1000 genomes]
rs73024672	0.94[EUR][1000 genomes]
rs73024677	0.82[EUR][1000 genomes]
rs73024678	0.94[EUR][1000 genomes]
rs73024680	0.94[EUR][1000 genomes]
rs73024689	0.94[EUR][1000 genomes]
rs73026652	0.94[EUR][1000 genomes]
rs73026692	0.94[EUR][1000 genomes]
rs73026697	0.94[EUR][1000 genomes]
rs7615392	0.94[EUR][1000 genomes]
rs7622968	0.94[EUR][1000 genomes]
rs7632687	0.94[EUR][1000 genomes]
rs7644291	0.94[EUR][1000 genomes]
rs9681730	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv592085	chr3:155827634-156012679	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155835200-155836600	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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