Variant report

Variant	rs73026692
Chromosome Location	chr3:155846588-155846589
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 62 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs11927350	1.00[EUR][1000 genomes]
rs13318658	1.00[EUR][1000 genomes]
rs1386959	1.00[EUR][1000 genomes]
rs16825644	1.00[AMR][1000 genomes]
rs16825729	1.00[EUR][1000 genomes]
rs16825730	1.00[EUR][1000 genomes]
rs16825750	1.00[EUR][1000 genomes]
rs55720401	1.00[ASN][1000 genomes]
rs57299583	1.00[EUR][1000 genomes]
rs57615525	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs58151385	1.00[AMR][1000 genomes]
rs58387367	1.00[AMR][1000 genomes]
rs59555928	1.00[AMR][1000 genomes]
rs59619851	1.00[EUR][1000 genomes]
rs59897122	1.00[EUR][1000 genomes]
rs60206885	1.00[AMR][1000 genomes]
rs61314882	1.00[EUR][1000 genomes]
rs6441033	1.00[EUR][1000 genomes]
rs67167156	1.00[AMR][1000 genomes]
rs6784161	1.00[AMR][1000 genomes]
rs6788822	1.00[AMR][1000 genomes]
rs6790987	1.00[ASN][1000 genomes]
rs6809972	1.00[ASN][1000 genomes]
rs73012220	1.00[AMR][1000 genomes]
rs73012225	1.00[AMR][1000 genomes]
rs73012245	1.00[AMR][1000 genomes]
rs73012911	1.00[AMR][1000 genomes]
rs73012929	1.00[AMR][1000 genomes]
rs73012940	1.00[AMR][1000 genomes]
rs73012954	1.00[AMR][1000 genomes]
rs73014113	1.00[AMR][1000 genomes]
rs73014850	1.00[AMR][1000 genomes]
rs73018956	1.00[AMR][1000 genomes]
rs73018983	1.00[AMR][1000 genomes]
rs73018986	1.00[AMR][1000 genomes]
rs73018995	1.00[AMR][1000 genomes]
rs73022671	1.00[AMR][1000 genomes]
rs73024639	1.00[EUR][1000 genomes]
rs73024663	1.00[AMR][1000 genomes]
rs73024672	1.00[EUR][1000 genomes]
rs73024677	0.88[EUR][1000 genomes]
rs73024678	1.00[EUR][1000 genomes]
rs73024680	1.00[EUR][1000 genomes]
rs73024689	1.00[EUR][1000 genomes]
rs73026652	1.00[EUR][1000 genomes]
rs73026681	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73026694	1.00[AMR][1000 genomes]
rs73026697	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73028515	1.00[AMR][1000 genomes]
rs73028523	1.00[AMR][1000 genomes]
rs73028525	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs73028526	1.00[AMR][1000 genomes]
rs73876115	1.00[ASN][1000 genomes]
rs73876120	1.00[ASN][1000 genomes]
rs7615392	1.00[EUR][1000 genomes]
rs7622968	1.00[EUR][1000 genomes]
rs7632687	1.00[EUR][1000 genomes]
rs7644291	1.00[EUR][1000 genomes]
rs7647673	1.00[ASN][1000 genomes]
rs9681730	1.00[EUR][1000 genomes]
rs9816433	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv592085	chr3:155827634-156012679	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155838800-155850200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:155844600-155849200	Weak transcription	Brain Hippocampus Middle	brain
3	chr3:155845600-155848800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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