Variant report

Variant	rs73026694
Chromosome Location	chr3:155849054-155849055
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs16825644	1.00[AMR][1000 genomes]
rs57615525	1.00[AMR][1000 genomes]
rs58151385	1.00[AMR][1000 genomes]
rs58387367	1.00[AMR][1000 genomes]
rs59555928	1.00[AMR][1000 genomes]
rs60206885	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs67167156	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6770571	0.84[AFR][1000 genomes]
rs6784161	1.00[AMR][1000 genomes]
rs6788822	1.00[AMR][1000 genomes]
rs73012220	1.00[AMR][1000 genomes]
rs73012225	1.00[AMR][1000 genomes]
rs73012245	1.00[AMR][1000 genomes]
rs73012911	1.00[AMR][1000 genomes]
rs73012929	1.00[AMR][1000 genomes]
rs73012940	1.00[AMR][1000 genomes]
rs73012954	1.00[AMR][1000 genomes]
rs73014113	1.00[AMR][1000 genomes]
rs73014850	1.00[AMR][1000 genomes]
rs73018956	1.00[AMR][1000 genomes]
rs73018983	1.00[AMR][1000 genomes]
rs73018986	1.00[AMR][1000 genomes]
rs73018995	1.00[AMR][1000 genomes]
rs73022671	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73024663	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73026681	1.00[AMR][1000 genomes]
rs73026692	1.00[AMR][1000 genomes]
rs73026697	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73028515	1.00[AMR][1000 genomes]
rs73028523	1.00[AMR][1000 genomes]
rs73028525	1.00[AMR][1000 genomes]
rs73028526	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv592085	chr3:155827634-156012679	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155838800-155850200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:155844600-155849200	Weak transcription	Brain Hippocampus Middle	brain
3	chr3:155848400-155850200	Enhancers	Adipose Nuclei	Adipose
4	chr3:155848600-155850400	Enhancers	Aorta	Aorta
5	chr3:155848600-155850400	Enhancers	Fetal Muscle Leg	muscle
6	chr3:155848600-155850400	Enhancers	Ovary	ovary
7	chr3:155848800-155850000	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr3:155848800-155851000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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