The 2.0 version of rSNPBase

Variant report

Variant rs9910011
Chromosome Location chr17:16938609-16938610
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16932200-16939800 Enhancers Muscle Satellite Cultured Cells --
2 chr17:16932400-16940600 Enhancers HSMM muscle
3 chr17:16932800-16944200 Weak transcription Fetal Brain Female brain
4 chr17:16934600-16944600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr17:16935200-16940800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr17:16935400-16941200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr17:16935600-16944400 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr17:16935800-16945200 Weak transcription Aorta Aorta
9 chr17:16936000-16938800 Weak transcription Left Ventricle heart
10 chr17:16936000-16938800 Weak transcription Psoas Muscle Psoas
11 chr17:16936000-16938800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr17:16936000-16938800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr17:16936000-16939000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr17:16936000-16939000 Weak transcription Placenta Amnion Placenta Amnion
15 chr17:16936000-16939200 Weak transcription Placenta Placenta
16 chr17:16936000-16939800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr17:16936000-16939800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr17:16936000-16939800 Weak transcription Stomach Smooth Muscle stomach
19 chr17:16936000-16939800 Weak transcription Spleen Spleen
20 chr17:16936000-16940000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr17:16936000-16940000 Weak transcription Lung lung
22 chr17:16936000-16940000 Weak transcription Right Atrium heart
23 chr17:16936000-16940000 Weak transcription NHLF lung
24 chr17:16936000-16940200 Weak transcription Pancreas Pancrea
25 chr17:16936000-16942000 Weak transcription Fetal Intestine Large intestine
26 chr17:16936000-16943200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr17:16936000-16943400 Weak transcription Fetal Brain Male brain
28 chr17:16936000-16944200 Weak transcription Duodenum Mucosa Duodenum
29 chr17:16936000-16944400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr17:16936000-16944400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr17:16936000-16944400 Weak transcription Brain Inferior Temporal Lobe brain
32 chr17:16936000-16944400 Weak transcription Colonic Mucosa Colon
33 chr17:16936000-16944400 Weak transcription Rectal Mucosa Donor 29 rectum
34 chr17:16936000-16944400 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr17:16936000-16944400 Enhancers A549 lung
36 chr17:16936000-16944400 Weak transcription NHEK skin
37 chr17:16936000-16944600 Weak transcription Gastric stomach
38 chr17:16936000-16944600 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr17:16936000-16944800 Weak transcription Brain Angular Gyrus brain
40 chr17:16936000-16944800 Weak transcription Esophagus oesophagus
41 chr17:16936200-16938800 Weak transcription Fetal Muscle Leg muscle
42 chr17:16936200-16939000 Weak transcription Fetal Stomach stomach
43 chr17:16936200-16939400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr17:16936200-16939800 Weak transcription NHDF-Ad bronchial
45 chr17:16936200-16940000 Weak transcription Adipose Nuclei Adipose
46 chr17:16936200-16940000 Weak transcription Hela-S3 cervix
47 chr17:16936200-16940800 Weak transcription Liver Liver
48 chr17:16936200-16942000 Weak transcription Fetal Intestine Small intestine
49 chr17:16936200-16943200 Weak transcription Brain Anterior Caudate brain
50 chr17:16936200-16944200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015