Variant report

Variant	rs10064040
Chromosome Location	chr5:144896851-144896852
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 80 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:80)

rs_ID	r²[population]
rs10053951	0.91[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs10054020	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10062505	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10064198	0.81[AMR][1000 genomes]
rs10066886	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10477284	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10515551	0.81[EUR][1000 genomes]
rs10515552	0.97[ASN][1000 genomes]
rs10515554	0.97[ASN][1000 genomes]
rs10515557	0.90[ASN][1000 genomes]
rs11948853	0.90[ASN][1000 genomes]
rs13361864	0.81[AMR][1000 genomes]
rs13435950	0.90[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1347160	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1347161	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs1433035	0.86[ASN][1000 genomes]
rs1433039	0.94[ASN][1000 genomes]
rs1529705	0.94[ASN][1000 genomes]
rs1560685	0.90[ASN][1000 genomes]
rs17103568	0.97[ASN][1000 genomes]
rs17103583	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs17103584	0.97[ASN][1000 genomes]
rs17103587	0.94[ASN][1000 genomes]
rs17103591	0.94[ASN][1000 genomes]
rs17103595	0.94[ASN][1000 genomes]
rs17103600	0.94[ASN][1000 genomes]
rs17103601	0.94[ASN][1000 genomes]
rs17103610	0.94[ASN][1000 genomes]
rs17103621	0.90[ASN][1000 genomes]
rs17103624	0.90[ASN][1000 genomes]
rs17103632	0.83[ASN][1000 genomes]
rs1865011	0.81[AMR][1000 genomes]
rs1982071	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2099326	0.84[AMR][1000 genomes]
rs2195937	0.81[AMR][1000 genomes]
rs2195939	0.86[ASN][1000 genomes]
rs28429609	0.84[AMR][1000 genomes]
rs28883046	0.81[EUR][1000 genomes]
rs35784567	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs4509079	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4598024	0.80[EUR][1000 genomes]
rs56839506	0.81[AMR][1000 genomes]
rs57531568	0.80[ASN][1000 genomes]
rs59699846	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs60101315	0.81[AMR][1000 genomes]
rs61119648	0.90[ASN][1000 genomes]
rs61352712	0.86[ASN][1000 genomes]
rs62392286	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62392290	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62392303	0.86[ASN][1000 genomes]
rs62392311	0.86[ASN][1000 genomes]
rs62392313	0.83[ASN][1000 genomes]
rs62394190	0.81[AMR][1000 genomes]
rs62394193	0.84[AMR][1000 genomes]
rs62394194	0.84[AMR][1000 genomes]
rs62394213	0.81[AMR][1000 genomes]
rs62394216	0.80[EUR][1000 genomes]
rs6580381	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6862768	0.86[ASN][1000 genomes]
rs6875249	0.84[AMR][1000 genomes]
rs6881485	0.84[AMR][1000 genomes]
rs6883434	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6884591	0.81[AMR][1000 genomes]
rs6884613	0.81[AMR][1000 genomes]
rs6892552	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73302055	0.90[ASN][1000 genomes]
rs73311527	0.84[AMR][1000 genomes]
rs73313774	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73794410	0.90[ASN][1000 genomes]
rs73794411	0.90[ASN][1000 genomes]
rs7449409	0.94[ASN][1000 genomes]
rs7711332	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7720071	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7722597	0.97[ASN][1000 genomes]
rs7733723	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9324986	0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs953421	0.81[AMR][1000 genomes]
rs953422	0.81[AMR][1000 genomes]
rs956178	0.94[ASN][1000 genomes]
rs9885537	0.84[AMR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:144879600-144900000	Weak transcription	Small Intestine	intestine
2	chr5:144890200-144901200	Weak transcription	Duodenum Mucosa	Duodenum
3	chr5:144892200-144911000	Weak transcription	Aorta	Aorta

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