Variant report

Variant	rs1033213
Chromosome Location	chr2:180523980-180523981
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10199992	0.90[CHB][hapmap];0.84[ASN][1000 genomes]
rs10497548	1.00[CHB][hapmap];0.90[ASN][1000 genomes]
rs10803927	0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs11889789	1.00[JPT][hapmap]
rs13035546	0.94[ASN][1000 genomes]
rs1515286	0.90[AFR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1515291	0.84[ASN][1000 genomes]
rs17821260	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[YRI][hapmap];0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1877941	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[YRI][hapmap];0.80[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2037112	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2276573	1.00[CHB][hapmap];0.94[JPT][hapmap];0.93[YRI][hapmap];0.93[AFR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3106718	0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs3106720	0.95[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs3106722	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs3112932	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3112935	0.95[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs3112972	0.94[CHB][hapmap];0.89[JPT][hapmap]
rs34227133	0.95[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs62175185	0.84[ASN][1000 genomes]
rs62175186	0.90[ASN][1000 genomes]
rs6708189	0.94[JPT][hapmap]
rs6718207	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7557247	0.91[CHB][hapmap];0.88[YRI][hapmap];0.89[ASN][1000 genomes]
rs7557455	0.82[YRI][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180522600-180525400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr2:180523400-180524600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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