The 2.0 version of rSNPBase

Variant report

Variant rs10779585
Chromosome Location chr1:213034449-213034450
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213030400-213034600 Active TSS Pancreatic Islets Pancreatic Islet
2 chr1:213030400-213035600 Active TSS H9 Cell Line embryonic stem cell
3 chr1:213030600-213035000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:213030800-213035200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
5 chr1:213032400-213034600 Enhancers Spleen Spleen
6 chr1:213032600-213034600 Enhancers Primary B cells from peripheral blood blood
7 chr1:213032600-213034600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
8 chr1:213032600-213034600 Enhancers Fetal Heart heart
9 chr1:213032600-213034600 Enhancers Left Ventricle heart
10 chr1:213032600-213034600 Enhancers Pancreas Pancrea
11 chr1:213032600-213034600 Active TSS NHLF lung
12 chr1:213032600-213037000 Enhancers Primary monocytes fromperipheralblood blood
13 chr1:213032600-213046400 Weak transcription Ovary ovary
14 chr1:213032600-213049200 Weak transcription Right Atrium heart
15 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
16 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
17 chr1:213032800-213034600 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr1:213032800-213034600 Enhancers Primary T helper cells fromperipheralblood blood
19 chr1:213032800-213034600 Enhancers Right Ventricle heart
20 chr1:213032800-213034600 Enhancers Skeletal Muscle Female skeletal muscle
21 chr1:213032800-213036200 Enhancers Monocytes-CD14+_RO01746 blood
22 chr1:213032800-213036400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr1:213032800-213046400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr1:213032800-213048000 Weak transcription Rectal Smooth Muscle rectum
25 chr1:213032800-213056800 Weak transcription Fetal Thymus thymus
26 chr1:213032800-213057800 Weak transcription Placenta Placenta
27 chr1:213032800-213061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:213032800-213062000 Weak transcription Psoas Muscle Psoas
29 chr1:213033000-213034600 Genic enhancers Fetal Muscle Leg muscle
30 chr1:213033200-213034600 Flanking Active TSS Muscle Satellite Cultured Cells --
31 chr1:213033200-213034600 Flanking Active TSS HUVEC blood vessel
32 chr1:213033200-213034800 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
33 chr1:213033200-213035800 Enhancers Small Intestine intestine
34 chr1:213033400-213034600 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
35 chr1:213033400-213034600 Enhancers Brain Anterior Caudate brain
36 chr1:213033400-213034600 Enhancers Stomach Mucosa stomach
37 chr1:213033400-213038200 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
38 chr1:213033400-213046800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:213033400-213046800 Weak transcription Stomach Smooth Muscle stomach
40 chr1:213033600-213034600 Enhancers NHDF-Ad bronchial
41 chr1:213033600-213035000 Active TSS ES-WA7 Cell Line embryonic stem cell
42 chr1:213033600-213037000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:213033600-213046800 Weak transcription Liver Liver
44 chr1:213033600-213048600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr1:213033600-213062000 Weak transcription Thymus Thymus
46 chr1:213033800-213034600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:213033800-213034600 Flanking Active TSS NH-A brain
48 chr1:213033800-213034600 Flanking Active TSS Osteobl bone
49 chr1:213033800-213034800 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
50 chr1:213033800-213036000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015