The 2.0 version of rSNPBase

Variant report

Variant rs10779587
Chromosome Location chr1:213035573-213035574
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213030400-213035600 Active TSS H9 Cell Line embryonic stem cell
2 chr1:213032600-213037000 Enhancers Primary monocytes fromperipheralblood blood
3 chr1:213032600-213046400 Weak transcription Ovary ovary
4 chr1:213032600-213049200 Weak transcription Right Atrium heart
5 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
6 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
7 chr1:213032800-213036200 Enhancers Monocytes-CD14+_RO01746 blood
8 chr1:213032800-213036400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr1:213032800-213046400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:213032800-213048000 Weak transcription Rectal Smooth Muscle rectum
11 chr1:213032800-213056800 Weak transcription Fetal Thymus thymus
12 chr1:213032800-213057800 Weak transcription Placenta Placenta
13 chr1:213032800-213061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:213032800-213062000 Weak transcription Psoas Muscle Psoas
15 chr1:213033200-213035800 Enhancers Small Intestine intestine
16 chr1:213033400-213038200 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
17 chr1:213033400-213046800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr1:213033400-213046800 Weak transcription Stomach Smooth Muscle stomach
19 chr1:213033600-213037000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr1:213033600-213046800 Weak transcription Liver Liver
21 chr1:213033600-213048600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr1:213033600-213062000 Weak transcription Thymus Thymus
23 chr1:213033800-213036000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
24 chr1:213033800-213037600 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
25 chr1:213034000-213035800 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:213034000-213037400 Weak transcription Primary T cells fromperipheralblood blood
27 chr1:213034000-213037400 Weak transcription Fetal Muscle Trunk muscle
28 chr1:213034200-213037000 Weak transcription Primary T cells from cord blood blood
29 chr1:213034400-213035600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
30 chr1:213034400-213035600 Weak transcription Primary hematopoietic stem cells blood
31 chr1:213034400-213037200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:213034400-213037200 Weak transcription Adipose Nuclei Adipose
33 chr1:213034400-213041200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:213034400-213044800 Weak transcription HSMMtube muscle
35 chr1:213034400-213046200 Weak transcription Fetal Lung lung
36 chr1:213034400-213046600 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr1:213034400-213046600 Weak transcription Brain Cingulate Gyrus brain
38 chr1:213034400-213048200 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr1:213034400-213048400 Weak transcription Brain Hippocampus Middle brain
40 chr1:213034400-213058000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr1:213034400-213068000 Weak transcription Colon Smooth Muscle Colon
42 chr1:213034600-213035600 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr1:213034600-213035600 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr1:213034600-213035600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:213034600-213035600 Weak transcription Brain Angular Gyrus brain
46 chr1:213034600-213035600 Weak transcription Fetal Intestine Small intestine
47 chr1:213034600-213035600 Weak transcription HUVEC blood vessel
48 chr1:213034600-213035800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
49 chr1:213034600-213035800 Genic enhancers Primary hematopoietic stem cells short term culture blood
50 chr1:213034600-213035800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015