The 2.0 version of rSNPBase

Variant report

Variant rs1890932
Chromosome Location chr1:213046236-213046237
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213032600-213046400 Weak transcription Ovary ovary
2 chr1:213032600-213049200 Weak transcription Right Atrium heart
3 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
4 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
5 chr1:213032800-213046400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:213032800-213048000 Weak transcription Rectal Smooth Muscle rectum
7 chr1:213032800-213056800 Weak transcription Fetal Thymus thymus
8 chr1:213032800-213057800 Weak transcription Placenta Placenta
9 chr1:213032800-213061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:213032800-213062000 Weak transcription Psoas Muscle Psoas
11 chr1:213033400-213046800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:213033400-213046800 Weak transcription Stomach Smooth Muscle stomach
13 chr1:213033600-213046800 Weak transcription Liver Liver
14 chr1:213033600-213048600 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr1:213033600-213062000 Weak transcription Thymus Thymus
16 chr1:213034400-213046600 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr1:213034400-213046600 Weak transcription Brain Cingulate Gyrus brain
18 chr1:213034400-213048200 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr1:213034400-213048400 Weak transcription Brain Hippocampus Middle brain
20 chr1:213034400-213058000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
21 chr1:213034400-213068000 Weak transcription Colon Smooth Muscle Colon
22 chr1:213034600-213046400 Weak transcription Brain Anterior Caudate brain
23 chr1:213034600-213046400 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr1:213034600-213046600 Weak transcription Primary B cells from peripheral blood blood
25 chr1:213034600-213046800 Weak transcription Primary B cells from cord blood blood
26 chr1:213034600-213046800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr1:213034600-213046800 Weak transcription NHDF-Ad bronchial
28 chr1:213034600-213047400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:213034600-213048000 Weak transcription Spleen Spleen
30 chr1:213034600-213048600 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr1:213034600-213048600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:213034600-213049200 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:213034600-213049200 Weak transcription Lung lung
34 chr1:213034600-213049400 Weak transcription Gastric stomach
35 chr1:213034600-213056200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr1:213034600-213057000 Weak transcription Brain Substantia Nigra brain
37 chr1:213034600-213057000 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr1:213034600-213057200 Weak transcription Right Ventricle heart
39 chr1:213034600-213061800 Weak transcription Fetal Heart heart
40 chr1:213034600-213067800 Weak transcription NHLF lung
41 chr1:213034600-213070600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:213035800-213046400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr1:213035800-213046400 Weak transcription Brain Angular Gyrus brain
44 chr1:213035800-213049400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr1:213035800-213073000 Weak transcription Small Intestine intestine
46 chr1:213036000-213070800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:213036200-213046800 Weak transcription HUVEC blood vessel
48 chr1:213036200-213062000 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr1:213036400-213062000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr1:213036600-213051400 Strong transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015