The 2.0 version of rSNPBase

Variant report

Variant rs10864010
Chromosome Location chr1:213034718-213034719
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213030400-213035600 Active TSS H9 Cell Line embryonic stem cell
2 chr1:213030600-213035000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:213030800-213035200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
4 chr1:213032600-213037000 Enhancers Primary monocytes fromperipheralblood blood
5 chr1:213032600-213046400 Weak transcription Ovary ovary
6 chr1:213032600-213049200 Weak transcription Right Atrium heart
7 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
8 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
9 chr1:213032800-213036200 Enhancers Monocytes-CD14+_RO01746 blood
10 chr1:213032800-213036400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr1:213032800-213046400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr1:213032800-213048000 Weak transcription Rectal Smooth Muscle rectum
13 chr1:213032800-213056800 Weak transcription Fetal Thymus thymus
14 chr1:213032800-213057800 Weak transcription Placenta Placenta
15 chr1:213032800-213061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr1:213032800-213062000 Weak transcription Psoas Muscle Psoas
17 chr1:213033200-213034800 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
18 chr1:213033200-213035800 Enhancers Small Intestine intestine
19 chr1:213033400-213038200 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
20 chr1:213033400-213046800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:213033400-213046800 Weak transcription Stomach Smooth Muscle stomach
22 chr1:213033600-213035000 Active TSS ES-WA7 Cell Line embryonic stem cell
23 chr1:213033600-213037000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:213033600-213046800 Weak transcription Liver Liver
25 chr1:213033600-213048600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:213033600-213062000 Weak transcription Thymus Thymus
27 chr1:213033800-213034800 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
28 chr1:213033800-213036000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
29 chr1:213033800-213037600 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
30 chr1:213034000-213034800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:213034000-213035000 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:213034000-213035000 Transcr. at gene 5' and 3' iPS-18 Cell Line embryonic stem cell
33 chr1:213034000-213035000 Transcr. at gene 5' and 3' Dnd41 blood
34 chr1:213034000-213035400 Weak transcription HSMM muscle
35 chr1:213034000-213035800 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr1:213034000-213037400 Weak transcription Primary T cells fromperipheralblood blood
37 chr1:213034000-213037400 Weak transcription Fetal Muscle Trunk muscle
38 chr1:213034200-213034800 Transcr. at gene 5' and 3' Fetal Adrenal Gland Adrenal Gland
39 chr1:213034200-213034800 Transcr. at gene 5' and 3' A549 lung
40 chr1:213034200-213035000 Transcr. at gene 5' and 3' H9 Derived Neuron Cultured Cells ES cell derived
41 chr1:213034200-213035000 Flanking Active TSS K562 blood
42 chr1:213034200-213037000 Weak transcription Primary T cells from cord blood blood
43 chr1:213034400-213034800 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:213034400-213034800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
45 chr1:213034400-213034800 Active TSS Brain Germinal Matrix brain
46 chr1:213034400-213034800 Genic enhancers Duodenum Smooth Muscle Duodenum
47 chr1:213034400-213034800 Enhancers Fetal Kidney kidney
48 chr1:213034400-213035000 Genic enhancers Fetal Intestine Large intestine
49 chr1:213034400-213035400 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr1:213034400-213035400 Active TSS GM12878-XiMat blood

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Last update: Aug 31, 2015