The 2.0 version of rSNPBase

Variant report

Variant rs7534973
Chromosome Location chr1:213053550-213053551
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
2 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
3 chr1:213032800-213056800 Weak transcription Fetal Thymus thymus
4 chr1:213032800-213057800 Weak transcription Placenta Placenta
5 chr1:213032800-213061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:213032800-213062000 Weak transcription Psoas Muscle Psoas
7 chr1:213033600-213062000 Weak transcription Thymus Thymus
8 chr1:213034400-213058000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:213034400-213068000 Weak transcription Colon Smooth Muscle Colon
10 chr1:213034600-213056200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr1:213034600-213057000 Weak transcription Brain Substantia Nigra brain
12 chr1:213034600-213057000 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:213034600-213057200 Weak transcription Right Ventricle heart
14 chr1:213034600-213061800 Weak transcription Fetal Heart heart
15 chr1:213034600-213067800 Weak transcription NHLF lung
16 chr1:213034600-213070600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:213035800-213073000 Weak transcription Small Intestine intestine
18 chr1:213036000-213070800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:213036200-213062000 Weak transcription Primary T killer memory cells from peripheral blood blood
20 chr1:213036400-213062000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr1:213037600-213073200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr1:213038400-213072000 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr1:213039400-213054000 Strong transcription Primary hematopoietic stem cells short term culture blood
24 chr1:213039600-213073000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:213040400-213073000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr1:213040800-213055200 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr1:213041400-213055000 Strong transcription Fetal Intestine Small intestine
28 chr1:213043200-213062000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:213043200-213073400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr1:213044000-213053800 Strong transcription Fetal Intestine Large intestine
31 chr1:213044400-213063200 Weak transcription Placenta Amnion Placenta Amnion
32 chr1:213044600-213053800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:213045000-213070800 Weak transcription Pancreas Pancrea
34 chr1:213046600-213055000 Weak transcription Stomach Mucosa stomach
35 chr1:213046600-213066400 Strong transcription Primary monocytes fromperipheralblood blood
36 chr1:213047000-213056800 Weak transcription HSMM muscle
37 chr1:213047000-213073600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr1:213047200-213055200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:213047200-213056400 Weak transcription NHDF-Ad bronchial
40 chr1:213047200-213059600 Weak transcription Brain Angular Gyrus brain
41 chr1:213047200-213061800 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr1:213047200-213062000 Weak transcription Brain Cingulate Gyrus brain
43 chr1:213047400-213054000 Strong transcription Fetal Stomach stomach
44 chr1:213047400-213059200 Weak transcription HUVEC blood vessel
45 chr1:213048800-213055200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:213048800-213056200 Weak transcription Brain Hippocampus Middle brain
47 chr1:213048800-213056200 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:213048800-213062600 Weak transcription ES-WA7 Cell Line embryonic stem cell
49 chr1:213049000-213056200 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr1:213049000-213056800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015