The 2.0 version of rSNPBase

Variant report

Variant rs10864009
Chromosome Location chr1:213034356-213034357
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213030400-213034600 Active TSS Pancreatic Islets Pancreatic Islet
2 chr1:213030400-213035600 Active TSS H9 Cell Line embryonic stem cell
3 chr1:213030600-213034400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr1:213030600-213035000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:213030800-213035200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
6 chr1:213032400-213034600 Enhancers Spleen Spleen
7 chr1:213032600-213034400 Enhancers Primary T helper naive cells from peripheral blood blood
8 chr1:213032600-213034400 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr1:213032600-213034600 Enhancers Primary B cells from peripheral blood blood
10 chr1:213032600-213034600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr1:213032600-213034600 Enhancers Fetal Heart heart
12 chr1:213032600-213034600 Enhancers Left Ventricle heart
13 chr1:213032600-213034600 Enhancers Pancreas Pancrea
14 chr1:213032600-213034600 Active TSS NHLF lung
15 chr1:213032600-213037000 Enhancers Primary monocytes fromperipheralblood blood
16 chr1:213032600-213046400 Weak transcription Ovary ovary
17 chr1:213032600-213049200 Weak transcription Right Atrium heart
18 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
19 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
20 chr1:213032800-213034400 Enhancers Primary hematopoietic stem cells blood
21 chr1:213032800-213034400 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr1:213032800-213034400 Enhancers Colon Smooth Muscle Colon
23 chr1:213032800-213034600 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr1:213032800-213034600 Enhancers Primary T helper cells fromperipheralblood blood
25 chr1:213032800-213034600 Enhancers Right Ventricle heart
26 chr1:213032800-213034600 Enhancers Skeletal Muscle Female skeletal muscle
27 chr1:213032800-213036200 Enhancers Monocytes-CD14+_RO01746 blood
28 chr1:213032800-213036400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr1:213032800-213046400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr1:213032800-213048000 Weak transcription Rectal Smooth Muscle rectum
31 chr1:213032800-213056800 Weak transcription Fetal Thymus thymus
32 chr1:213032800-213057800 Weak transcription Placenta Placenta
33 chr1:213032800-213061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:213032800-213062000 Weak transcription Psoas Muscle Psoas
35 chr1:213033000-213034400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:213033000-213034400 Enhancers Primary T regulatory cells fromperipheralblood blood
37 chr1:213033000-213034400 Enhancers Brain Cingulate Gyrus brain
38 chr1:213033000-213034600 Genic enhancers Fetal Muscle Leg muscle
39 chr1:213033200-213034400 Flanking Active TSS Brain Germinal Matrix brain
40 chr1:213033200-213034400 Transcr. at gene 5' and 3' NHEK skin
41 chr1:213033200-213034600 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr1:213033200-213034600 Flanking Active TSS HUVEC blood vessel
43 chr1:213033200-213034800 Transcr. at gene 5' and 3' ES-I3 Cell Line embryonic stem cell
44 chr1:213033200-213035800 Enhancers Small Intestine intestine
45 chr1:213033400-213034400 Enhancers Primary neutrophils fromperipheralblood blood
46 chr1:213033400-213034400 Enhancers Fetal Lung lung
47 chr1:213033400-213034600 Transcr. at gene 5' and 3' H1 Cell Line embryonic stem cell
48 chr1:213033400-213034600 Enhancers Brain Anterior Caudate brain
49 chr1:213033400-213034600 Enhancers Stomach Mucosa stomach
50 chr1:213033400-213038200 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015