The 2.0 version of rSNPBase

Variant report

Variant rs10779589
Chromosome Location chr1:213038588-213038589
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:213032600-213046400 Weak transcription Ovary ovary
2 chr1:213032600-213049200 Weak transcription Right Atrium heart
3 chr1:213032600-213073000 Weak transcription Colonic Mucosa Colon
4 chr1:213032600-213073000 Weak transcription Esophagus oesophagus
5 chr1:213032800-213046400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:213032800-213048000 Weak transcription Rectal Smooth Muscle rectum
7 chr1:213032800-213056800 Weak transcription Fetal Thymus thymus
8 chr1:213032800-213057800 Weak transcription Placenta Placenta
9 chr1:213032800-213061800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:213032800-213062000 Weak transcription Psoas Muscle Psoas
11 chr1:213033400-213046800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr1:213033400-213046800 Weak transcription Stomach Smooth Muscle stomach
13 chr1:213033600-213046800 Weak transcription Liver Liver
14 chr1:213033600-213048600 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr1:213033600-213062000 Weak transcription Thymus Thymus
16 chr1:213034400-213041200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:213034400-213044800 Weak transcription HSMMtube muscle
18 chr1:213034400-213046200 Weak transcription Fetal Lung lung
19 chr1:213034400-213046600 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr1:213034400-213046600 Weak transcription Brain Cingulate Gyrus brain
21 chr1:213034400-213048200 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr1:213034400-213048400 Weak transcription Brain Hippocampus Middle brain
23 chr1:213034400-213058000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr1:213034400-213068000 Weak transcription Colon Smooth Muscle Colon
25 chr1:213034600-213039000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:213034600-213039600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:213034600-213041400 Weak transcription Fetal Stomach stomach
28 chr1:213034600-213044200 Weak transcription Aorta Aorta
29 chr1:213034600-213044800 Weak transcription Left Ventricle heart
30 chr1:213034600-213044800 Weak transcription Pancreas Pancrea
31 chr1:213034600-213046000 Weak transcription HMEC breast
32 chr1:213034600-213046400 Weak transcription Brain Anterior Caudate brain
33 chr1:213034600-213046400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:213034600-213046600 Weak transcription Primary B cells from peripheral blood blood
35 chr1:213034600-213046800 Weak transcription Primary B cells from cord blood blood
36 chr1:213034600-213046800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr1:213034600-213046800 Weak transcription NHDF-Ad bronchial
38 chr1:213034600-213047400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr1:213034600-213048000 Weak transcription Spleen Spleen
40 chr1:213034600-213048600 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr1:213034600-213048600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:213034600-213049200 Weak transcription Brain Inferior Temporal Lobe brain
43 chr1:213034600-213049200 Weak transcription Lung lung
44 chr1:213034600-213049400 Weak transcription Gastric stomach
45 chr1:213034600-213056200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr1:213034600-213057000 Weak transcription Brain Substantia Nigra brain
47 chr1:213034600-213057000 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr1:213034600-213057200 Weak transcription Right Ventricle heart
49 chr1:213034600-213061800 Weak transcription Fetal Heart heart
50 chr1:213034600-213067800 Weak transcription NHLF lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015