Variant report

No.	Distal block	Cell Line	Cell type
1	chr11:19118812..19121642-chr11:19124277..19126198,2	K562	blood:
2	chr11:19119696..19122619-chr11:19124440..19126588,2	MCF-7	breast:
3	chr11:19124492..19126550-chr11:19131420..19133331,2	K562	blood:

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs1012929	0.98[EUR][1000 genomes]
rs1039512	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1039513	0.95[ASN][1000 genomes]
rs10500839	0.93[ASN][1000 genomes]
rs10833057	0.98[EUR][1000 genomes]
rs10833058	0.99[EUR][1000 genomes]
rs10833059	1.00[EUR][1000 genomes]
rs10833061	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10833062	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11024997	1.00[EUR][1000 genomes]
rs11025000	0.97[ASN][1000 genomes]
rs11025011	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11025012	1.00[ASN][1000 genomes]
rs11025013	0.98[EUR][1000 genomes]
rs11601935	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs11606080	1.00[EUR][1000 genomes]
rs2089051	1.00[EUR][1000 genomes]
rs4756987	0.98[EUR][1000 genomes]
rs4756988	0.98[EUR][1000 genomes]
rs4756989	0.98[EUR][1000 genomes]
rs60514147	1.00[ASN][1000 genomes]
rs68006237	0.88[AMR][1000 genomes]
rs7125292	0.91[EUR][1000 genomes]
rs7125678	0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040805	chr11:19037871-19892803	Enhancers Bivalent Enhancer Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
2	nsv540957	chr11:19037871-19892803	Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:19122800-19128000	Enhancers	Fetal Intestine Large	intestine
2	chr11:19123000-19126400	Enhancers	Duodenum Mucosa	Duodenum
3	chr11:19124400-19126000	Weak transcription	HUVEC	blood vessel
4	chr11:19124800-19126000	Enhancers	Small Intestine	intestine
5	chr11:19124800-19126200	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr11:19125000-19138600	Weak transcription	Gastric	stomach
7	chr11:19125400-19126800	Weak transcription	Fetal Intestine Small	intestine

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