The 2.0 version of rSNPBase

Variant report

Variant rs10865625
Chromosome Location chr3:88117764-88117765
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:88109400-88124400 Weak transcription Pancreas Pancrea
2 chr3:88110000-88118600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr3:88110000-88120400 Weak transcription Fetal Stomach stomach
4 chr3:88110000-88120400 Weak transcription Fetal Thymus thymus
5 chr3:88110000-88121000 Weak transcription Primary B cells from peripheral blood blood
6 chr3:88110200-88124200 Weak transcription Fetal Kidney kidney
7 chr3:88110400-88120200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr3:88111200-88117800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr3:88111400-88121600 Weak transcription Fetal Brain Male brain
10 chr3:88111400-88124200 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr3:88111400-88133600 Weak transcription Brain Angular Gyrus brain
12 chr3:88111400-88136200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr3:88111400-88136200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr3:88111600-88118000 Enhancers Primary T helper cells PMA-I stimulated --
15 chr3:88111600-88119800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr3:88111600-88121200 Weak transcription NHLF lung
17 chr3:88111600-88123200 Weak transcription Liver Liver
18 chr3:88111600-88124000 Weak transcription Right Atrium heart
19 chr3:88111600-88124000 Weak transcription Sigmoid Colon Sigmoid Colon
20 chr3:88111600-88124000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr3:88111600-88124200 Weak transcription Fetal Lung lung
22 chr3:88111600-88135200 Weak transcription HSMM muscle
23 chr3:88111600-88135400 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr3:88111600-88135600 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr3:88111800-88123600 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr3:88111800-88135400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr3:88112200-88136600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr3:88112200-88154200 Weak transcription Muscle Satellite Cultured Cells --
29 chr3:88112400-88121200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr3:88112400-88124400 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr3:88112400-88143600 Weak transcription HUVEC blood vessel
32 chr3:88113200-88146200 Weak transcription HMEC breast
33 chr3:88113600-88121400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
34 chr3:88113800-88118000 Weak transcription Adipose Nuclei Adipose
35 chr3:88113800-88123000 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr3:88113800-88134800 Weak transcription Dnd41 blood
37 chr3:88114000-88118400 Weak transcription A549 lung
38 chr3:88114000-88122400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
39 chr3:88115200-88133400 Weak transcription Left Ventricle heart
40 chr3:88115600-88119800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr3:88115600-88120400 Weak transcription Fetal Intestine Small intestine
42 chr3:88115600-88124000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr3:88116200-88118800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr3:88116400-88118200 Strong transcription Primary hematopoietic stem cells blood
45 chr3:88116800-88118400 Weak transcription Colon Smooth Muscle Colon
46 chr3:88116800-88124200 Weak transcription Brain Hippocampus Middle brain
47 chr3:88116800-88139800 Weak transcription Thymus Thymus
48 chr3:88117000-88118200 Strong transcription K562 blood
49 chr3:88117000-88121600 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr3:88117000-88124400 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015