The 2.0 version of rSNPBase

Variant report

Variant rs9835178
Chromosome Location chr3:88132414-88132415
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:88111400-88133600 Weak transcription Brain Angular Gyrus brain
2 chr3:88111400-88136200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr3:88111400-88136200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr3:88111600-88135200 Weak transcription HSMM muscle
5 chr3:88111600-88135400 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr3:88111600-88135600 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr3:88111800-88135400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr3:88112200-88136600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr3:88112200-88154200 Weak transcription Muscle Satellite Cultured Cells --
10 chr3:88112400-88143600 Weak transcription HUVEC blood vessel
11 chr3:88113200-88146200 Weak transcription HMEC breast
12 chr3:88113800-88134800 Weak transcription Dnd41 blood
13 chr3:88115200-88133400 Weak transcription Left Ventricle heart
14 chr3:88116800-88139800 Weak transcription Thymus Thymus
15 chr3:88117000-88133800 Weak transcription Aorta Aorta
16 chr3:88117000-88135800 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr3:88120600-88135400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr3:88121000-88135400 Weak transcription Fetal Thymus thymus
19 chr3:88121400-88136400 Weak transcription Primary B cells from peripheral blood blood
20 chr3:88121800-88141800 Weak transcription NHLF lung
21 chr3:88124000-88135400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr3:88124400-88133400 Weak transcription Small Intestine intestine
23 chr3:88124400-88135400 Weak transcription Fetal Intestine Large intestine
24 chr3:88124600-88133400 Weak transcription Pancreas Pancrea
25 chr3:88124600-88135200 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr3:88124800-88133400 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr3:88124800-88135400 Weak transcription A549 lung
28 chr3:88125000-88132800 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr3:88125000-88133200 Weak transcription Stomach Mucosa stomach
30 chr3:88125000-88134800 Weak transcription Primary T cells from cord blood blood
31 chr3:88125000-88135400 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr3:88125000-88135400 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr3:88125000-88135800 Weak transcription Primary monocytes fromperipheralblood blood
34 chr3:88125000-88135800 Weak transcription Liver Liver
35 chr3:88125000-88136400 Weak transcription Brain Anterior Caudate brain
36 chr3:88125200-88133400 Weak transcription Right Ventricle heart
37 chr3:88125200-88136600 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr3:88125200-88163600 Weak transcription NHDF-Ad bronchial
39 chr3:88125800-88133200 Weak transcription Colon Smooth Muscle Colon
40 chr3:88125800-88143800 Weak transcription HepG2 liver
41 chr3:88127000-88135400 Weak transcription Primary T cells fromperipheralblood blood
42 chr3:88127200-88139000 Weak transcription HUES48 Cell Line embryonic stem cell
43 chr3:88127600-88135400 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr3:88128200-88139800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
45 chr3:88128400-88142200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr3:88128800-88136000 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr3:88128800-88198200 Weak transcription Esophagus oesophagus
48 chr3:88129400-88135200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr3:88129400-88135800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr3:88129400-88144200 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015