The 2.0 version of rSNPBase

Variant report

Variant rs9861398
Chromosome Location chr3:88164103-88164104
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:88128800-88198200 Weak transcription Esophagus oesophagus
2 chr3:88129600-88180200 Weak transcription NHEK skin
3 chr3:88134000-88176400 Weak transcription Ovary ovary
4 chr3:88134800-88188200 Weak transcription Stomach Smooth Muscle stomach
5 chr3:88135600-88196800 Weak transcription Hela-S3 cervix
6 chr3:88137400-88188200 Weak transcription Fetal Kidney kidney
7 chr3:88138200-88180800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr3:88140400-88167000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr3:88140800-88176000 Weak transcription K562 blood
10 chr3:88141000-88165200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr3:88141000-88197800 Weak transcription Thymus Thymus
12 chr3:88141200-88167200 Weak transcription Liver Liver
13 chr3:88141200-88182200 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr3:88145200-88191000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr3:88145200-88198200 Weak transcription Aorta Aorta
16 chr3:88146400-88167400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr3:88146600-88166800 Weak transcription Primary hematopoietic stem cells blood
18 chr3:88146800-88179600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr3:88148000-88196400 Weak transcription Fetal Intestine Small intestine
20 chr3:88148800-88167200 Weak transcription Primary B cells from cord blood blood
21 chr3:88150000-88184600 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr3:88151400-88167000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:88152000-88197000 Weak transcription Lung lung
24 chr3:88154800-88183800 Weak transcription HUVEC blood vessel
25 chr3:88155400-88188000 Weak transcription Psoas Muscle Psoas
26 chr3:88155400-88188200 Weak transcription Right Ventricle heart
27 chr3:88155800-88189200 Weak transcription Colonic Mucosa Colon
28 chr3:88156000-88189000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr3:88156400-88167600 Weak transcription Fetal Muscle Leg muscle
30 chr3:88158800-88179600 Weak transcription Pancreas Pancrea
31 chr3:88159200-88164200 Weak transcription HMEC breast
32 chr3:88159600-88174800 Weak transcription Colon Smooth Muscle Colon
33 chr3:88159600-88180800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr3:88159600-88197800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr3:88160400-88179800 Weak transcription HSMMtube muscle
36 chr3:88161000-88197800 Weak transcription Fetal Stomach stomach
37 chr3:88161800-88184000 Weak transcription NH-A brain
38 chr3:88162200-88166400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr3:88162200-88167200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr3:88162200-88180600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr3:88162200-88188000 Weak transcription NHLF lung
42 chr3:88162400-88168000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr3:88162400-88180200 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr3:88162600-88164200 Weak transcription Muscle Satellite Cultured Cells --
45 chr3:88162600-88164800 Strong transcription Fetal Thymus thymus
46 chr3:88162600-88166000 Strong transcription Primary hematopoietic stem cells short term culture blood
47 chr3:88162600-88166000 Strong transcription HSMM muscle
48 chr3:88162600-88166200 Strong transcription Primary neutrophils fromperipheralblood blood
49 chr3:88162600-88168200 Strong transcription Primary B cells from peripheral blood blood
50 chr3:88162800-88164800 Strong transcription Fetal Lung lung

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Last update: Aug 31, 2015